| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2007 |
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| Symbol | |
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| ID | 4252580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2392995 |
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| End bp | 2393621 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638118620 |
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| Product | cbb3-type cytochrome c oxidase subunit II |
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| Protein accession | YP_734137 |
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| Protein GI | 113970344 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
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| TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.043331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000201585 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATTTA ATCATGAGAT AGTTGAAAAA AACATCGGTT TGTTAGCGAT CTTCACTGTT
ATCGCTATCA GCTTCGGTAG CTTGGTAGAA ATCACGCCGT TGATTTTCCA AAAAGATACC
ACTGAGCCTG TTGAAGGTTT GAAACCCTAC ACTGCCCTGC AGCTTGAAGG CCGTGACATT
TATGTGCGTG AAGGTTGCTA CAACTGCCAC AGCCAGATGA TCCGTCCTTT ACGTGCAGAG
ACTGAACGTT ACGGTCACTA CTCTGTTGCC GGTGAGTCTG TTTGGGATCA CCCATTCCAA
TGGGGTTCTA AGCGTACTGG TCCAGACTTG GCCCGTGTTG GTGGTCGCTA CAGCGATAAA
TGGCATGAAG TTCACTTAAT CGATCCTCGT GCTGTGGTCC CTCAATCGAA TATGCCAGGC
TTCCCATGGC TTGCCGAAAA CAAGTTAGAC GGCAAGTTAA CCGGCGACAA GATGACTATT
CTGCGTAACA TGCACAAAGG CGGTTACAAA GGTAATGATC TTTACACCGA TGAAGAAATC
GCAGGCGCTC AGAAAGCTGT TGAAGGTAAG ACAGAGCTGG AAGCCTTGAT TGCATATCTT
CAGTCTTTGG GTCACGCACT CAAATAA
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| Protein sequence | MKFNHEIVEK NIGLLAIFTV IAISFGSLVE ITPLIFQKDT TEPVEGLKPY TALQLEGRDI
YVREGCYNCH SQMIRPLRAE TERYGHYSVA GESVWDHPFQ WGSKRTGPDL ARVGGRYSDK
WHEVHLIDPR AVVPQSNMPG FPWLAENKLD GKLTGDKMTI LRNMHKGGYK GNDLYTDEEI
AGAQKAVEGK TELEALIAYL QSLGHALK
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