| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2001 |
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| Symbol | |
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| ID | 4252574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2385989 |
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| End bp | 2386897 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638118614 |
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| Product | SMP-30/gluconolaconase/LRE domain-containing protein |
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| Protein accession | YP_734131 |
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| Protein GI | 113970338 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3386] Gluconolactonase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00903181 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000314659 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAACGG TCACGGTTGG CGATCTGTTG ATGACAATCC CTGTGGGCAA CCGCCTTGGC
GAAGGTGTGC TATGGGATGA GTTACACCAA TCCATTTGGT GGACCGACAT TTTATCCTCT
GTGATTTATC GTTTTCATCT CGCGAGCCGC TCCTTAGAGA CTTTTTCCAT GCCACACCGC
GTCGGCTCCT TTGGCCTCAC GGCAAAGCCT ACAACACTTA TCGTCGCATT CGATATCGGT
ATTGCAACTT ATGATATTGA AGATCAAAGC CTGACATGGT TGGCGCAGCC AGAATCTCAT
TTTGCTGGCA ATCGCTTTAA TGATGGTCGC ATCGATAGGC AAGGGCGTTT TTGGGCGGGC
ACTATGGTTG AGCAGCGCGA TACTTTGCAA CAAACCGCAG CCCTGTATTG TCTAGATGAG
AAAGGGCATT GCCACCAACA CCTTACAAAT CTCGAAATCT CCAACGGCCT GTGCTGGAGC
GTGGATGGAC GAACGCTCTA CCATGCTGAT TCGCCAAAAC ACCAAATCTA TCAATATGAT
TTTGATATTG AGCAGGGGTT ATTGAGTCGT AAGCGCCTCT TTGCGAGCAC GAGCCATAAT
ATTTTCCCTG ATGGTTCAGA TGTCGATGCG GCGGGTTATC TCTGGAATGC CCAGTGGGGC
GGTGGCCAGG TGGTGCGCTA TCGTCCCGAT GGTGAAGTCG ATCTTATCCT CAAATTACCC
GTTACCCACC CAACCAGCAT CGCCTTTGGC GGCGAAAAGC GCGATTTACT GATCGTCACC
AGTGCCAAAC ACTCACTTAA CGCATCGCAA TTAGACCAAG AGCCGCAAGC TGGCGATGTG
TTTATCTACC CATTACAGGG TATTTGTGGT GTAAATAATC CACGTTACTT GAGTGGGGAT
CCATGGTGA
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| Protein sequence | MQTVTVGDLL MTIPVGNRLG EGVLWDELHQ SIWWTDILSS VIYRFHLASR SLETFSMPHR
VGSFGLTAKP TTLIVAFDIG IATYDIEDQS LTWLAQPESH FAGNRFNDGR IDRQGRFWAG
TMVEQRDTLQ QTAALYCLDE KGHCHQHLTN LEISNGLCWS VDGRTLYHAD SPKHQIYQYD
FDIEQGLLSR KRLFASTSHN IFPDGSDVDA AGYLWNAQWG GGQVVRYRPD GEVDLILKLP
VTHPTSIAFG GEKRDLLIVT SAKHSLNASQ LDQEPQAGDV FIYPLQGICG VNNPRYLSGD
PW
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