Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1997 |
Symbol | |
ID | 4252570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2377245 |
End bp | 2378000 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638118610 |
Product | hypothetical protein |
Protein accession | YP_734127 |
Protein GI | 113970334 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00150485 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00000598022 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCATACCG CCTGGTTCGA CTTTACGCTG ATCCCTATCG ATATATTCAC GCTGTTAACC TTAGCCTCGG CCTTTACTGC ATTTTTTACC GCCTGCTTCG GGATTGGTGG TGGCGTAATG TTATTAGGCG TGATGGCGCA AGTCCTTCCG CCTCAAGTAA TTATTCCCCT CCATGGCGTG GTGCAATTAG GCTCGAATCT GGGCCGCGCC CTATTAGGTT GGCAGCATGT GCAGTGGTGG CTTATCAGTC GTTTCTTACC TGGCGCGCTC GTTGGCGCCG CCTTGGGGAG CTTAGTGTTA GTCGCATTGC CGCCAAAGGT CATGTACCTC ACCATCGCCC TGTTTATTTT GTATTCCTGC TGGGGACCGA AAATCCCTCG CGTGGTGCTG GGAACAGCCG GGACGATAAT CGCTGGTGCG TTAACAACCT TTATCTCGTT ATTTGTCGGC GCGACAGGTC CCTTAGTAGC TGCCTTTATC AAACAATTAG ACGTTGACCG TTTTCGCACT GTCGCGACCT TTGCGATGGC GATGTCACTG CAACATGGCG TCAAAATTCT CGTTTTTGAG GGGCTGGATA TTCCTATCCT GCCGTGGTGG CCGCTGCTAC TCTGCATGAT TTTAAGCGGC GCCTTGGGAA CCTGGCTTGG CTTTAAGATG TTAGCGCGGG TGACGGATAA ACATTTCAGC GTCGCCTTTA ATTGGGTGCT GACACTGCTG GCGATACGTT TATTGTGGCA GGCCTTAGTG GGATAA
|
Protein sequence | MHTAWFDFTL IPIDIFTLLT LASAFTAFFT ACFGIGGGVM LLGVMAQVLP PQVIIPLHGV VQLGSNLGRA LLGWQHVQWW LISRFLPGAL VGAALGSLVL VALPPKVMYL TIALFILYSC WGPKIPRVVL GTAGTIIAGA LTTFISLFVG ATGPLVAAFI KQLDVDRFRT VATFAMAMSL QHGVKILVFE GLDIPILPWW PLLLCMILSG ALGTWLGFKM LARVTDKHFS VAFNWVLTLL AIRLLWQALV G
|
| |