| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1995 |
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| Symbol | |
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| ID | 4252568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2373911 |
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| End bp | 2374978 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118608 |
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| Product | arabinan endo-1,5-alpha-L-arabinosidase |
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| Protein accession | YP_734125 |
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| Protein GI | 113970332 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000026265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000968585 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAGCTA TGAGAGTCAC ACCGAAAACA GCCCTAAAAC GTCACCTTAA GATGCTCAAT
TGTGCGCTGC TAGGCGTATT GGGAACCCTA GGCCAAGCGA GTGCCAAACA GGTGAGTATT
CACGATCCTG TGATGGCAAA AGAGGCCGGA CAGTATTATC TCTTCAGCAC TGGCCCCGGC
ATTACCTATT ATTCCTCAAA GGATAAAATC CATTGGGAAT TAGCTGGGCG GGTATTCGAA
ACCGAGCCTA GCTGGGCAAA GGACGTTGCG CCAGAGTTTA ACGGCCATTT ATGGGCGCCG
GATATCATTG AGCATAACGG CTTGTTTTAT CTGTATTACT CAGTATCAGC CTTTGGTAAA
AACACCTCGG CCATTGGCGT GACAGTCAAT AAAACCCTCG ACAAAAACTC AAAGGAATAT
CAGTGGACAG ATAAGGGGAT CGTTATTCAA TCTGTGCCAA ATCGCGATGC ATGGAACGCG
ATTGATCCCA ATATTATTGT CGATGAGCAG GGTACACCTT GGATGAGTTT TGGCTCCTTT
TGGCAAGGGT TAAAACTGGT CAAACTCAAT CCAGACTTTA TCTCCATCTC CAAACCAGAG
GAGTGGCATA CGCTAGCCAA GTTAGAACGC CCCGCACTGC TTGGTGAAAC CGAGCCAGGC
CCTGCTGAAA TCGAAGCGCC GTTTATCTAT AAAAAAGATG ACTATTACTA TCTTTTTGTC
TCCTATGGCC TTTGCTGTCG TGGGGACGAC AGCACTTACC ACTTAGCCGT GGGCCGCACC
AAAACGGTGA CTGGGCCTTA CCTCGATAAA GAGGGCAAAG ACATGGCGCA AGGCGGCGGT
TCGGTTTTAC TGCATGGCAC TAAGGCTTGG CCGGGATTGG GCCATAACAG TGTTTATGCC
TTCGATGGCA AAGATTACTT AGTCTTTCAT GCCTACGAAT CGGCTGATAA TGGCTTACAA
AAACTCAAGA TGGCGGAACT GAGCTGGCGC CAAGGTTGGC CAGAGGTCGA TCCTAAGGCG
CTCAATCAAT ACCAGAGCGT ATTAGTTGCA CCCGAAGGAA CAAAATAA
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| Protein sequence | MPAMRVTPKT ALKRHLKMLN CALLGVLGTL GQASAKQVSI HDPVMAKEAG QYYLFSTGPG
ITYYSSKDKI HWELAGRVFE TEPSWAKDVA PEFNGHLWAP DIIEHNGLFY LYYSVSAFGK
NTSAIGVTVN KTLDKNSKEY QWTDKGIVIQ SVPNRDAWNA IDPNIIVDEQ GTPWMSFGSF
WQGLKLVKLN PDFISISKPE EWHTLAKLER PALLGETEPG PAEIEAPFIY KKDDYYYLFV
SYGLCCRGDD STYHLAVGRT KTVTGPYLDK EGKDMAQGGG SVLLHGTKAW PGLGHNSVYA
FDGKDYLVFH AYESADNGLQ KLKMAELSWR QGWPEVDPKA LNQYQSVLVA PEGTK
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