| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1994 |
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| Symbol | |
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| ID | 4252567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2372257 |
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| End bp | 2373702 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118607 |
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| Product | sugar (glycoside-Pentoside-hexuronide) transporter |
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| Protein accession | YP_734124 |
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| Protein GI | 113970331 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00859833 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00113965 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTTCTC ATAAATTGTC AGTCATTGAA AAGATCGGTT ACGGCTCCGG GGACATGGCC
GTTAACGTGG TGATTTCGTC AATGATGTTA ATTATTACCT TCTTTTATAC CGATATTTTT
GGGTTAAAAC CCGCCGATGT CGGGATATTG TTCCTGTTGG TTCGCCTTAT CGATGCCATT
ACCGATCCTT TAATGGGCAT TATTAACGAT AAAGTGACGA CCCGCTGGGG AAGATATCGC
CCCTACTTCC TGTTTATGGC GATTCCCTTT GGTATTTCGG TTTTCTTAAC CTTCTCAACC
CCAGATTGGG ATTACAATGC CAAACTTATC TGGGCTTACT CGACCTATAT TCTGGTCACT
ATCATCTTCA CCACTGTGAC TATTCCGTAT ATTTCGATTA TCAGCGTGAT CACCGACGAT
CCTAAAGAGC GGTTATCCGC CAACGGTTAT CGTTTGTTCT TCGCAAAGAT TGCCGCCTTT
TTAGTGACCA TTATCGTGCC TATGCTAGCG TCTGCCTGGG GCGGAGAGAA CATTGCCGCG
GGCTATCAAA AAGCCATGGG CGTGATGGCA TTGATGGCAA CACTACTGTT TTTATTCTGC
TTTTTCACTA CCACAGAGCG CGTGGCCTAC AAGGTGGAAA CTAAGCCTGT TGGCATGCAA
CTGCGATTAT TGTTCAAAAA CGATCAATGG TTAGTATTAG TCGCGATTTG TGTGATTGGC
ACCATTGGCT ATGTGATCCG CGGCTCGGTA GCAGCCTACT ACGCCACCTA TTACTTGGGC
GGCGATGCCA AAATGCTCTC GGCATTCCTG TCGACCGGTG TGGGTGCCGC GATTCTGGCC
ATGGTCGCTT CTACTTGGAT CACTAAGCGT TACTGCAAAC TAAAACTCTT CCGCTACAGC
CAAATCGTGG TTGGGATCTT AAGCGTCATC ATGTTCTTTG CCGTGCAGCC GGGCGACATA
GTGCTGGCCT TTGTACTCTA TTTTTCGATT TCATTCGTGG TGGATTTACA TGCGCCTGTC
TTCTGGTCGG TGATTTCCGA GTCGGTGGAT TATGGCACAG TCAAAACGGG CCACAGGGTC
TCTGGCCTTG CCTTTGGCGG GATTTCATTC GCCCAAAAAG CGGGTATGGG CGCGGCGGGA
TTTGTGGTGG GTATGCTGCT GACCTACTTC AACTATCAAC CCGGTGAAAC CCAAAGCGAG
TTTGCGTTGA CCGGTATTTC GTTAATGCTG ACGGTGATCC CTGGCGCATT CCACGCGCTG
ATGGGCTTAC TGATGTTCAA ATACAAGATT TCTGACCGCG TTTATGAAGA AATCAAACAG
GCTTTACCCG AGCAGGCCCA TTCAAGCCAA ACGGACGCCA ACCTGACGTC TAAGGCTCTA
GCCTCTAGCA CTGAATCCTC TGAGGCCGTA ACGCCTAAGA CTGCTGCGCC CCAAGTATCG
GCGTAA
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| Protein sequence | MSSHKLSVIE KIGYGSGDMA VNVVISSMML IITFFYTDIF GLKPADVGIL FLLVRLIDAI
TDPLMGIIND KVTTRWGRYR PYFLFMAIPF GISVFLTFST PDWDYNAKLI WAYSTYILVT
IIFTTVTIPY ISIISVITDD PKERLSANGY RLFFAKIAAF LVTIIVPMLA SAWGGENIAA
GYQKAMGVMA LMATLLFLFC FFTTTERVAY KVETKPVGMQ LRLLFKNDQW LVLVAICVIG
TIGYVIRGSV AAYYATYYLG GDAKMLSAFL STGVGAAILA MVASTWITKR YCKLKLFRYS
QIVVGILSVI MFFAVQPGDI VLAFVLYFSI SFVVDLHAPV FWSVISESVD YGTVKTGHRV
SGLAFGGISF AQKAGMGAAG FVVGMLLTYF NYQPGETQSE FALTGISLML TVIPGAFHAL
MGLLMFKYKI SDRVYEEIKQ ALPEQAHSSQ TDANLTSKAL ASSTESSEAV TPKTAAPQVS
A
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