| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1989 |
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| Symbol | |
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| ID | 4252562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2365483 |
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| End bp | 2366445 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638118602 |
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| Product | inner membrane ABC transporter permease protein YjfF |
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| Protein accession | YP_734119 |
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| Protein GI | 113970326 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0141667 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGCAA GACGTTTTAT TCCGCTGTGG ATCACCGCCT CATTGCTGCT GACCATGTTT
TTGGTCGGCA CCTTTCAGTT TGACGGTTTT GCCAGTGGCC GAGTGGTCAC CAACCTGTTG
CGTGACAATG CATTCCTATT GATCACCGCA TTAGGTATGA CCTTAGTGAT TATCTCTGGG
GGGATCGATC TCTCGGTTGG CGCCGTCATC GCCTTAAGTG GAGTCGTCAC CAGTTTATTG
ATCACCGAGT ACCAGTGGCA TCCATTGTTG GCCTTTGCGG TTATTCTGCC CCTGGGCACT
CTGTTTGGCG CGCTCATGGG CACTATTATC CATGTGTATA AGTTGCAGCC ATTTATTGTG
ACGCTTGCGG GGATGTTTCT GGCGCGGGGC TTAGCGACGA CGCTCAGCGA AGAGTCGATT
GCCATTGACC ATCCATTTTA CGATGCGGTG GCCGAGATGA GCATTGCACT ACCAGGCAAT
GGTGCGCTCG ATTTAAGCTC GCTGATCTTT ATCCTGTTCT TTGTGATTAT CGCCGTGGTT
ATGCATTACA CCCGTTTTGG TACGAATGTG TATGCCATTG GTGGCAATCA ACATTCCGCC
GAGCTAATGG GGATTTCCAT CGCTAAAACC ACCATCAGTA TTTACGCCAT CAGTAGCTTC
CTGGCGACGC TGGCGGGCAT TGTCTTTACC TTTTACACCT TCTCTGGCTA TGCGCTTGGC
GCCATTGGCG TCGAACTGGA TGCCATTGCG GCCGTAGTCA TTGGTGGCAC CCTGTTAACT
GGCGGCAGTG GCTTTGTGCT CGGCACTGTG CTTGGGGTGA TTTTGATGGG GGTGATTCAA
ACCTATATTA CCTTCGATGG CAGCTTAAGC AGTTGGTGGA CCAAGATTGT CATTGGCCTG
TTACTGTTCT TCTTCATCCT GTTACAGAAA CTCTTGAATG GACGCAAAAC ACAACATGGA
TAA
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| Protein sequence | MIARRFIPLW ITASLLLTMF LVGTFQFDGF ASGRVVTNLL RDNAFLLITA LGMTLVIISG
GIDLSVGAVI ALSGVVTSLL ITEYQWHPLL AFAVILPLGT LFGALMGTII HVYKLQPFIV
TLAGMFLARG LATTLSEESI AIDHPFYDAV AEMSIALPGN GALDLSSLIF ILFFVIIAVV
MHYTRFGTNV YAIGGNQHSA ELMGISIAKT TISIYAISSF LATLAGIVFT FYTFSGYALG
AIGVELDAIA AVVIGGTLLT GGSGFVLGTV LGVILMGVIQ TYITFDGSLS SWWTKIVIGL
LLFFFILLQK LLNGRKTQHG
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