| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1983 |
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| Symbol | |
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| ID | 4252556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2357999 |
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| End bp | 2359732 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638118596 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_734113 |
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| Protein GI | 113970320 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000233691 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0422763 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATA AAAAACCGAA AACACTTCGT TCGGCTAGTT GGTTTGGTAG TGATGACAAA
AATGGCTTTA TGTATCGCAG TTGGATGAAA AACCAAGGCA TACCCGAGCA TCACTTTCAA
AATAAGCCTG TAATTGGTAT TTGCAATACC TGGTCAGAAT TGACGCCCTG TAATGGTCAT
CTACGGGAAT TGGCGCAAAG AGTAAAGAAT GGCATTCGGG AAGCGGGTGG CATTCCAGTG
GAGTTTCCAG TGTTTTCGAA TGGCGAGTCC AACTTACGTC CAAGCGCCAT GCTTACCCGT
AATCTTGCTG CCATGGACAC GGAAGAAGCC ATTCGAGGCA ACCCCATCGA CGGAGTTGTG
CTGTTAGTGG GCTGTGATAA AACGACTCCG GCTTTATTGA TGGGCGCGGC CAGTTGTGAT
TTACCGACAA TCGTTGTTAC CGGTGGTCCC ATGCTCAATG GTAAGCATAA GGGCAAGGAT
GTCGGTTCGG GCACTCTCGT ATGGGAACTG CATCAAGAAT ATAAAGCGGG CAACATCAGT
CTCGCCGCAT TTATGAATGC CGAAGCGGAT ATGTCACGCT CAACGGGCAC CTGCAACACT
ATGGGCACAG CATCGACCAT GGCCTGTATG GTGGAAACCC TTGGGGTGAG TTTGCCACAC
AATGCAGCCA TTCCTGCGGT GGATTCTCGC CGCCAAGTAT TGGCGCATAT GTCGGGAATG
CGAATTGTGG ACATGGTCAA AGAGGATTTG ACCTTAAGTA AAATTTTAAG CCGTGATGCT
TTTATCAATG CCATCAAAGT CAATGCTGCC ATTGGTGGTT CAACCAACGC CGTTATCCAT
TTAAAGGCGA TTGCCGGCAG GATAGGGGTT GAGCTGTCAC TCGATGACTG GCGCCATGGT
TACACAGTAC CGACCATAGT GAATCTTAAG CCTTCGGGTC AGTACTTAAT GGAAGACTTT
TACTACGCAG GTGGCCTGCC AGCAGTATTA AGGCAGCTGT TTGAGCATGA TTTACTGAGC
AAAAACACGC TTACAGTCAA TGCCGCTAGC CTCTGGGACA ATGTCAAAGA GGCGCCTTGT
TATAACCAAG AGGTGATCAT GTCACTTGAA AATCCCTTGG TTGAAAATGG CGGCATTCGC
GTACTTCGCG GCAATCTCGC GCCCCGAGGC GCAGTGATCA AAACGTCAGC CGCCAGCGCA
CACCTGATGC AACACCGCGG TAAAGCCGTG GTGTTTGAAA GCTTCGACGA TTACAACGCC
CGCATCGGCG ATCCTGAATT GGATATCGAT GAAAACAGCA TTATGGTGCT TAAAAACTGT
GGCCCGAAGG GATATCCGGG CATGGCTGAG GTCGGCAATA TGGGACTGCC ACCTAAGTTG
TTGAAAAAAG GAATTAAGGA CATGGTTAGG ATTTCTGATG CACGCATGAG TGGCACCGCC
TTTGGCACAG TTGTGCTGCA TGTTGCCCCA GAAGCACAAG CCCTTGGGCC ACTGGCCGCC
GTTCAAAATG GTGACATGAT AGCGCTTGAT ACCTATGCCG GAACGTTACA GCTGGAGATC
AGTGACCAAG AGTTACAAGC CCGTCTTGCC AAACTGGCGA CGGTGAAATC CATTCCCGTG
AATGGTGGCT ATCTCTCGCT ATTTAAGGAG CATGTTCTCC AGGCGGATGA GGGATGTGAT
TTTGATTTTC TCGTGGGATG TCGAGGTGCA GAGATACCAG CACATTCCCA TTAA
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| Protein sequence | MNNKKPKTLR SASWFGSDDK NGFMYRSWMK NQGIPEHHFQ NKPVIGICNT WSELTPCNGH
LRELAQRVKN GIREAGGIPV EFPVFSNGES NLRPSAMLTR NLAAMDTEEA IRGNPIDGVV
LLVGCDKTTP ALLMGAASCD LPTIVVTGGP MLNGKHKGKD VGSGTLVWEL HQEYKAGNIS
LAAFMNAEAD MSRSTGTCNT MGTASTMACM VETLGVSLPH NAAIPAVDSR RQVLAHMSGM
RIVDMVKEDL TLSKILSRDA FINAIKVNAA IGGSTNAVIH LKAIAGRIGV ELSLDDWRHG
YTVPTIVNLK PSGQYLMEDF YYAGGLPAVL RQLFEHDLLS KNTLTVNAAS LWDNVKEAPC
YNQEVIMSLE NPLVENGGIR VLRGNLAPRG AVIKTSAASA HLMQHRGKAV VFESFDDYNA
RIGDPELDID ENSIMVLKNC GPKGYPGMAE VGNMGLPPKL LKKGIKDMVR ISDARMSGTA
FGTVVLHVAP EAQALGPLAA VQNGDMIALD TYAGTLQLEI SDQELQARLA KLATVKSIPV
NGGYLSLFKE HVLQADEGCD FDFLVGCRGA EIPAHSH
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