| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1977 |
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| Symbol | |
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| ID | 4252550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2351238 |
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| End bp | 2352911 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638118590 |
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| Product | ribulokinase |
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| Protein accession | YP_734107 |
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| Protein GI | 113970314 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1069] Ribulose kinase |
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| TIGRFAM ID | [TIGR01234] L-ribulokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000489271 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.124359 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAATG TTTTAGGGGC TTACGCGTTA GGGCTTGATT ACGGCTCAGA TTCAGTTCGC
GCGTTATTGG TGGATACCCA AACGGGCGCA GAAGTAGCAA CGAATGTGGT TTACTACCCA
CGTTGGAAGA AGGGGCTTTT TTGCGATCCT GCCAAGAATC AATTTAGACA ACATCCCCTC
GATTACATCG AAAGCCTTAT CGAGGTAGTT CAAGGACTCT GGGCAAAAGC TCCCAGTGGC
GCCGCGCAAA GAGTCTGCGG TTTGAGTGTT GATACCACAG GCTCAACCCC GATTGCGGTT
GATGAATCCG GTGTTGCTCT AGCCTTAAAG CCAGAGTTTG CGAGTAATCC CAATGCCATG
TTTTTGCTTT GGAAAGATCA CAGCGCCATC CTCGAAGCCC AGCAAATTAC CGCTGCGGCA
AACAATGCAA GTGAAAACTA CCTGAAATAT GAAGGAGGAA TTTACTCCTC CGAATGGTTT
TGGGCGAAAG CGCTATTTGT ATTGCGCCAC GACACAGAAG TCAGACAAGC CGCTTATAGC
TGGGTCGAAC ACTGTGATTG GATCACCGCA TTAATGACAG GCACCACACA TCCAAAAGTC
TTTAAGGCAG GGCGCTGCGC CGCCGGTCAC AAAGTGATGT GGCATGAGTC ATGGAATGGT
TATCCGCCGA ATGACTTTTT CGTTGGTATC GACCCCTTAC TCGATGGATT GAGAGACAAG
TTACCGCTTG AAACCTGCAC ATCTGACAAA GTTTGCGGCC AGCTAACCCC TGAGTGGGCT
CAGCATTTAG GGCTATCGAC CGAGGTTATT GTATCTTTTG GCTCATTTGA CTGCCACGCA
GGCGCCGTTG GAGCCAATGT TAAACCTGGT GTCTTAACCA AGGTGATGGG GACTTCTACC
TGCGACATTA CGGTCGCCAG TTATGATGAT ATAGGTGAGC GTTGTATCAA AGGTATTTGC
GGTCAAGTGG ATGGCTCAGT ATTACCCGGC ATGATAGGGC TGGAAGCGGG TCAGTCAGCC
TTCGGCGATC TCTACGCTTG GTTTAGGGAT CTCACCGCAT GGCCGATGCA ACAGCTTGAC
ACCTCTGCCT TATTTGATGA CAACACCAAA GCCAAACTCA TTCAGCAACT CGAATCTGAA
ACCCTGACAA TGTTAGGCAA TGCGGCTGCG AAAATTCCCG TTGGCGAGAC TGGTATTGTC
GCGCTGGATT GGATTAACGG ACGTCGCACC CCCGATGCCG ACCAATCTGT TGCCATGGCT
ATCACAGGGT TAACCATGGG CAGCCAAGCA CCGCAAGTCT TCAAAGCTTT AGTGGAAGCC
AGTGCCTATG GCGCACGGGC CATTATCGAG CGCTTCAAAC AAGAAGGCGT TTGCATTGAC
CATGTGGTCA CCATTGGTGG GATCTCGAAA AAATCCGACT TCATTATGCA AACCTGTGCC
GATGTGTGGA ATTGCAACAT CGACGTACTC GAGAGCGAGC AAAGCTGTGC CCTAGGCGCC
GCTATTTATG CTGCAACCGC AGCCGGGGTT TATCCCGATG TGCTGAGTGC CCAAGCCGCC
ATGGCCTCAA ACGTTGCGAA AACCTATCAG CCAAATCCTG AAAACGCAGA GAAATATCAA
GCGCTTTACC AAGGGTACTT AGCCCTTGGC CACTATGTTG ATGGAGCGAA ATAA
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| Protein sequence | MSNVLGAYAL GLDYGSDSVR ALLVDTQTGA EVATNVVYYP RWKKGLFCDP AKNQFRQHPL
DYIESLIEVV QGLWAKAPSG AAQRVCGLSV DTTGSTPIAV DESGVALALK PEFASNPNAM
FLLWKDHSAI LEAQQITAAA NNASENYLKY EGGIYSSEWF WAKALFVLRH DTEVRQAAYS
WVEHCDWITA LMTGTTHPKV FKAGRCAAGH KVMWHESWNG YPPNDFFVGI DPLLDGLRDK
LPLETCTSDK VCGQLTPEWA QHLGLSTEVI VSFGSFDCHA GAVGANVKPG VLTKVMGTST
CDITVASYDD IGERCIKGIC GQVDGSVLPG MIGLEAGQSA FGDLYAWFRD LTAWPMQQLD
TSALFDDNTK AKLIQQLESE TLTMLGNAAA KIPVGETGIV ALDWINGRRT PDADQSVAMA
ITGLTMGSQA PQVFKALVEA SAYGARAIIE RFKQEGVCID HVVTIGGISK KSDFIMQTCA
DVWNCNIDVL ESEQSCALGA AIYAATAAGV YPDVLSAQAA MASNVAKTYQ PNPENAEKYQ
ALYQGYLALG HYVDGAK
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