| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1952 |
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| Symbol | |
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| ID | 4252525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2330077 |
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| End bp | 2330697 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638118564 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_734082 |
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| Protein GI | 113970289 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000576135 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.348603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTACTG GTATAGTTCA AGCCACCTGT GAGGTGGTTG CAATACATAA GAAAGATGGC
CTAAATACCC TTGAGGTAGC GTTTAAACCT GATTTGCATG AGGGACTTGC GATCGGTGCA
AGTGTGGCAA ATAACGGGGT ATGTCTGACG GTGACTCAGG TCGTTGATGA TAGGGTATTT
TTCGATGTAG TGGAAGAGAC CTTAAGGTTG ACAAACCTTG CCAATTTGAC CGTTGGCCAG
CGGGTGAACA TTGAGCGTTC TTTGACGTTT GGCAGCGAAA TCGGCGGCCA TATCCTCTCG
GGACACATTC ATACTAAGGC GAAAGTGAGC CACATTAGTC ACACCGAGCA GCATTATGAT
CTAACCTTAA GCGTCGAGCC CAAATGGATG AACTATATCC TTTATAAAGG TTTTGTCGGG
GTAAACGGTT GCAGCTTAAC GGTAGGCGAG GTGACCGAAA GCAGTTTTAT GCTGCACTTG
ATCCCAGAAA CCCTCAAATT AACCAATTTA GGCCAGTGTC AGGTCGGAGA TGAGTTAAAT
ATCGAAATTG ACAGCCAAAC CCAAGCGATC GTCGACACCG TCGAACGCGT GCTGGCCAAA
CGTTTTAGCG GCCAATCTTA A
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| Protein sequence | MFTGIVQATC EVVAIHKKDG LNTLEVAFKP DLHEGLAIGA SVANNGVCLT VTQVVDDRVF
FDVVEETLRL TNLANLTVGQ RVNIERSLTF GSEIGGHILS GHIHTKAKVS HISHTEQHYD
LTLSVEPKWM NYILYKGFVG VNGCSLTVGE VTESSFMLHL IPETLKLTNL GQCQVGDELN
IEIDSQTQAI VDTVERVLAK RFSGQS
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