Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1947 |
Symbol | |
ID | 4252521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2323997 |
End bp | 2324548 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638118558 |
Product | ecotin |
Protein accession | YP_734078 |
Protein GI | 113970285 |
COG category | [R] General function prediction only |
COG ID | [COG4574] Serine protease inhibitor ecotin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.22639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.198889 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTGA CTCACGTATT TAACACTGCG GCTCTTCCCC TTGCCTTTGC ATTACTGTCT TTTAATGCCG CAGCAGTGAG CCTACCACAT CCAACGGGAT TAAATGCACC TATGATCAGT GTCGCGAGTT TCAACCATAA AAATTATGCC GAGCAAGAAG CCACGAAAAT GTTTCCTGCA CCTGAGGCGG GTATGGTGCA ACATATTTTG ACCTTACCTA AACTAGAAAA TGAAGACGAT TACATGGTTG AAATCCAAAT TGGCCAGACC CAATTAGTCG ACTGTAATAA GCATGGTTTG AACGGCGAGT TAAAAGAACT CTCGGTTAAG GGATGGGGTT ATAGCTATTA TCAAGTGTCT GAAGTCTCAG AAGGCCCAAG CACTATGATG GCCTGTTTAG AGATGGCAAA AAAAGAAGCC TTTGTCCGCA TTCCTGGTGA ACTTAAAATG CGTTACGACA GCCGTTTGCC TAAGGTATTT TATCTACCAG AAGGCACAGA GCTGCGCTTT AGAACCTGGA AAGTCGATTC AACTTATCAC TACGCTAAAT AA
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Protein sequence | MKLTHVFNTA ALPLAFALLS FNAAAVSLPH PTGLNAPMIS VASFNHKNYA EQEATKMFPA PEAGMVQHIL TLPKLENEDD YMVEIQIGQT QLVDCNKHGL NGELKELSVK GWGYSYYQVS EVSEGPSTMM ACLEMAKKEA FVRIPGELKM RYDSRLPKVF YLPEGTELRF RTWKVDSTYH YAK
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