Gene Shewmr4_1947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1947 
Symbol 
ID4252521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2323997 
End bp2324548 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content43% 
IMG OID638118558 
Productecotin 
Protein accessionYP_734078 
Protein GI113970285 
COG category[R] General function prediction only 
COG ID[COG4574] Serine protease inhibitor ecotin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.22639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.198889 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGA CTCACGTATT TAACACTGCG GCTCTTCCCC TTGCCTTTGC ATTACTGTCT 
TTTAATGCCG CAGCAGTGAG CCTACCACAT CCAACGGGAT TAAATGCACC TATGATCAGT
GTCGCGAGTT TCAACCATAA AAATTATGCC GAGCAAGAAG CCACGAAAAT GTTTCCTGCA
CCTGAGGCGG GTATGGTGCA ACATATTTTG ACCTTACCTA AACTAGAAAA TGAAGACGAT
TACATGGTTG AAATCCAAAT TGGCCAGACC CAATTAGTCG ACTGTAATAA GCATGGTTTG
AACGGCGAGT TAAAAGAACT CTCGGTTAAG GGATGGGGTT ATAGCTATTA TCAAGTGTCT
GAAGTCTCAG AAGGCCCAAG CACTATGATG GCCTGTTTAG AGATGGCAAA AAAAGAAGCC
TTTGTCCGCA TTCCTGGTGA ACTTAAAATG CGTTACGACA GCCGTTTGCC TAAGGTATTT
TATCTACCAG AAGGCACAGA GCTGCGCTTT AGAACCTGGA AAGTCGATTC AACTTATCAC
TACGCTAAAT AA
 
Protein sequence
MKLTHVFNTA ALPLAFALLS FNAAAVSLPH PTGLNAPMIS VASFNHKNYA EQEATKMFPA 
PEAGMVQHIL TLPKLENEDD YMVEIQIGQT QLVDCNKHGL NGELKELSVK GWGYSYYQVS
EVSEGPSTMM ACLEMAKKEA FVRIPGELKM RYDSRLPKVF YLPEGTELRF RTWKVDSTYH
YAK