| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1942 |
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| Symbol | |
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| ID | 4252516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2316876 |
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| End bp | 2318933 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638118553 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_734073 |
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| Protein GI | 113970280 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3211] Predicted phosphatase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0591004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0783573 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGG CCACCTTTGA CCCGACACTT TATAATAAAA GTAATAACGA ACCTTTTAAT
CAAGTGTTGG ATAAACATTT ATCCCGCCGC AATTTTGTTA AAAGCGGATT AGGCCTAGGG
GCAATGACCG CTTTTGCAGG TGTGGGATTA GTAGGCTGTG GTTCAGACAG TTCGCCCGCC
CCAACCCCTA TAGATCCCGT GCCGCCACTG CCACCAACTC AAAGTAGCGC TAAATTAAAC
TTCACATCAG TCGCTGGCGC TCGCTTGGAT GCGGTTGTGG TACCCGAAGG TTACAGCGCC
CAAGTACTCG CCCCTTGGGG AACACCATTA AATTCTAAGG CTGCGCCTTG GAAAGCCGAT
GGCAGCAATA CCGCCGATGA CCAAGCAAAC TCCGTTGGTA TGCACCATGA TGGCATGCAT
TTCTTCCCAT TGAATGACGC CGGCGATGAC GGTTTACTCT GTATCAACCA TGAATATATC
GATGAGATGG CCTTACATCC TTATGGCCCA ACCGTGGATG AAACCATTGG ATTACGGACC
ATAATCGATG AGGTCCGTAA GGAAATTAAT GCCCACGGCG TGTCGGTGGT AAGAATTAAA
CTCATTAATA ATCAATGGGA AGTTGTTTAC AACGACGACC ATAACCGCCG CTTTACTGGC
GCAACTGTGA TGGATATCGC CGGCCCCCTC GCCTATTCAC CGCTACTCGA AACCCGTTAC
TCCCCCGATG GCAGTCAAGC TCGTGGCACC TTAAATAACT GTGGTAATGG TTACACGCCT
TGGGGCACCT ATTTGACCTG CGAAGAAAAC TGGCCGGGTT ACTTTGCCAA CCGTGGCACT
TTAGCCGCCG ATCAAGCGCG CATCGGGATC AGCAAAAGCA GCACTCGCTA TGGCTGGGGT
GATTTAGCGG GTCACGCCGA GGAACGTCTC GATGAATTCG CGCGTTTTGA TGTCACGCCA
AAGGGCAATA GTGCACAAGA TGATTATCGC AACGAGGCTA ATGGCCACGG TTATATCGTT
GAAATTGACC CCTACAATCC AAGTTCACGC GCCATCAAAC GAACTGCCCT TGGCCGCTTC
CGCCACGAGG GTTGTACCTT CGGAAAATTA GCCGAAGGTA AGCCTGTGGT GTTCTACTCT
GGCCACGATT CTCGATTCGA ATACTTATAT AAATTTGTGT CGAATGCGGT GTGGGATCCA
CAGGATGCCA ACAGCTCAAA TCGCCTGCAA ATGGGTGATA AGTATATGAA TGAAGGAACA
TTATATGCCG CTAAGTTTAA CGAAAATGGC GGTGGTGTCT GGTTACCTTT AACCTTAGAT
AGCCAAACGA CAGACGGTAA AACCCTAGGT GATAGCTTTG CCAGTCTGGC CGAGATTATC
TTAAATACCG CGGGTGCAGC GGATTTAGTC GGCGCGACAC CTATGGATCG ACCTGAATGG
TGTGCGGTAG ACCCCTTCAC AGGTTCAGCC TATTTAACCC TGACCAACAA CTCTAAACGT
ACCGAAGCTA ACCCTGCCAA CCCCAGACTC AAAAACACCT TTGGACATAT TATTCGTTGG
GATGAAGGTG ATATAGACAC TGAATTCACA TGGGATATTT TTGTCTTTGG CTCACCGAGT
GATGGCAATG CCGAGACCAA CCTGTCGGGC TTAACGGATC TAAACCAATT TGCCAGCCCC
GATGGATTGG CCTTCGACGC CCGCGGTATT TTATGGGTGC AAACCGATAA TGGTGCCAAA
GAAGTCGCCG AAGAAACCAA CGATCAAATG CTGGCGATTG TGCCATCGAC CTTAGTCGAC
AGTGCTAACA AGCAAGCGAG TGTGACGGCC GAAAACCAAA TGGAATTGAA GCGTTTCTTT
GTCGGGCCAA ACGATTGCGA AGTCACAGGT TTTGCAATCA GCCCCGATTA CACTTCGGTT
TTTGCCAACA TTCAGCATCC GGGTAACTGG CCTTATTCGA ATAATGCCGC CGAAATAACG
CCTGCTGGTA CCGTGCTGCG TCCACGCGCG GCAACGGTTG TTATTCGTAA ACTCGATGGT
AAAGAAGTGG CGGTCTAA
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| Protein sequence | MSKATFDPTL YNKSNNEPFN QVLDKHLSRR NFVKSGLGLG AMTAFAGVGL VGCGSDSSPA
PTPIDPVPPL PPTQSSAKLN FTSVAGARLD AVVVPEGYSA QVLAPWGTPL NSKAAPWKAD
GSNTADDQAN SVGMHHDGMH FFPLNDAGDD GLLCINHEYI DEMALHPYGP TVDETIGLRT
IIDEVRKEIN AHGVSVVRIK LINNQWEVVY NDDHNRRFTG ATVMDIAGPL AYSPLLETRY
SPDGSQARGT LNNCGNGYTP WGTYLTCEEN WPGYFANRGT LAADQARIGI SKSSTRYGWG
DLAGHAEERL DEFARFDVTP KGNSAQDDYR NEANGHGYIV EIDPYNPSSR AIKRTALGRF
RHEGCTFGKL AEGKPVVFYS GHDSRFEYLY KFVSNAVWDP QDANSSNRLQ MGDKYMNEGT
LYAAKFNENG GGVWLPLTLD SQTTDGKTLG DSFASLAEII LNTAGAADLV GATPMDRPEW
CAVDPFTGSA YLTLTNNSKR TEANPANPRL KNTFGHIIRW DEGDIDTEFT WDIFVFGSPS
DGNAETNLSG LTDLNQFASP DGLAFDARGI LWVQTDNGAK EVAEETNDQM LAIVPSTLVD
SANKQASVTA ENQMELKRFF VGPNDCEVTG FAISPDYTSV FANIQHPGNW PYSNNAAEIT
PAGTVLRPRA ATVVIRKLDG KEVAV
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