| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1931 |
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| Symbol | |
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| ID | 4252505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2300908 |
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| End bp | 2302665 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118542 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_734062 |
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| Protein GI | 113970269 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00101819 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000203538 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCCTT ACCAAGCTCC GTTAGCGGAT ATGCGTTTCT TATTGGAACA GGTTTTTGAT
GCGCCAAATA CTTGGGCACA ACTCCCTGAT ATTGCTGAAA TGGTCGATAT GGATACGGCC
GGCGCGATTC TCGAAGAAGC CGCGAAAATC AGTGCTGAAT TAATCCATCC GCTTAACCGT
GCTGGCGATG AGCAAGGTGT TCTTCATCAG GATAATCGAG TGATTACGCC CGATGGTTAT
AAAGCCGTTT ACGATCAATA TTCCCAAGGC GGCTGGGTGG GCCTGTGTGG TGAACCCGAG
TTTGGTGGTA TGGGTATGCC GAAAATGCTC GGTGTGTTAG TCGATGAAAT GGCTTACAGC
GCCTGTAATG CATTTACCCT GTATGGTTCA CTCACGGCTG GTGCCGCGCT GTGTATTAAT
GCCCACGGCA GTGAAGAGAT CAAAGAAACC TATTTACCAA AACTCTACAG CGGTGAATGG
GCAGGGGCTA TGGATATGAC GGAGCCTCAG GCGGGCTCAG ATCTACGTAA TATCCGTACC
CGTGCGATCC CACAGGATGA CGGCAGTTAT GCCATCAGCG GCAGCAAGAT TTTTATCACG
GGTGGCGATC ATGATTTAAC CGAGAACGTC ATTCATTTAG TGCTCGCAAA ACTTCCTGAA
AGCAAAGGTA TTTCACTGTT CCTCGTGCCT AAAACAACGG TCAATGCCGA TGGCAGTTTA
GGCCAAGCGA ACGGTGTCAC TGTCGGTTCA ATCGAACACA AAATGGGTCT TAAGGGCTCT
GCAACCTGCG TGATGAACTT TGATGAGGCC AAAGGTTACC TGATTGGCGA GCCTAATCGT
GGTCTAGTGT GTATGTTCAC TATGATGAAT TACGAACGTT TAGCCATTGG TATTCAAGGG
CTTGGCAGTG CACAAGCCGC TTATCAAATG GCCGCCGATT ATGCCAAAGA GCGCAACCAA
GGCGTTGCCG CTGGCGGCTC ACCTACGGGC AGCGACTCCG ATCCTATTAT TGTGCATGGT
GACGTGCGTC GTATGCTGAT GACAATCAGA GCGATGACAG AGGCGGGGCG CGCACTCTCA
GTATTTACCG GTAAACAACT CGATTTAGCA AAATATGCCG AAGATGAAGT TAAAGCCAAG
GCTGCTCGTT ATGTGGGCTT GTTAACACCT GTAGCGAAAG CATTTTTAAC AGACCGTGGT
TTAGATGCCA CTATCATGGC ACAGCAAGTG TTTGGTGGTC ATGGCTATAT TCGCGAAACA
GGCATTGAGC AGTTAGTACG TGATACTCGT ATTGCCCAGA TTTACGAAGG TACCAACGGC
ATTCAGGCCA TCGACTTCCT CGGTCGAAAA GTCACAGGTG ACAACTTAGC GACGCTAAAA
GAATTTGTCG CCGAGTTGAA AGCGCAAATG CGCGGGTTCA CCCGAGTTGA TGCGGTGAAA
GTGGCCGCCG TTTGTGCCCG TTTAGATGCC TTAGTCATTG TCGCTGAGTC AGTCAATGAA
CACAAAGTCG CTCAGCCAGC ACTAATCAAC GCGAGTGCCG TCGACTTTTT GGATGCCTTT
GGTTACACCC TCTATGGTTT CTATTGGTTA GCCATGTTAG ATAAAGCCGT TGATGCTGAA
GATAAACAGT TTGCCGAGCA GAAATCCTAC CTAGCCAAAT TCTATTTCGA CAAGTTGCTG
CCTAAAGCTG ACTATCACTT AGCGCAAGTG CGCGCGGGAG ATACCAGCAC AATGGCGATA
CCAGCAGAAC TGTTCTAA
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| Protein sequence | MNPYQAPLAD MRFLLEQVFD APNTWAQLPD IAEMVDMDTA GAILEEAAKI SAELIHPLNR
AGDEQGVLHQ DNRVITPDGY KAVYDQYSQG GWVGLCGEPE FGGMGMPKML GVLVDEMAYS
ACNAFTLYGS LTAGAALCIN AHGSEEIKET YLPKLYSGEW AGAMDMTEPQ AGSDLRNIRT
RAIPQDDGSY AISGSKIFIT GGDHDLTENV IHLVLAKLPE SKGISLFLVP KTTVNADGSL
GQANGVTVGS IEHKMGLKGS ATCVMNFDEA KGYLIGEPNR GLVCMFTMMN YERLAIGIQG
LGSAQAAYQM AADYAKERNQ GVAAGGSPTG SDSDPIIVHG DVRRMLMTIR AMTEAGRALS
VFTGKQLDLA KYAEDEVKAK AARYVGLLTP VAKAFLTDRG LDATIMAQQV FGGHGYIRET
GIEQLVRDTR IAQIYEGTNG IQAIDFLGRK VTGDNLATLK EFVAELKAQM RGFTRVDAVK
VAAVCARLDA LVIVAESVNE HKVAQPALIN ASAVDFLDAF GYTLYGFYWL AMLDKAVDAE
DKQFAEQKSY LAKFYFDKLL PKADYHLAQV RAGDTSTMAI PAELF
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