| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1928 |
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| Symbol | |
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| ID | 4252502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2298493 |
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| End bp | 2299188 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638118539 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_734059 |
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| Protein GI | 113970266 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000128014 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000403388 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGACGACCA AACCTATCCT CGTAGCGCTT GATTACGATA ATAAAAACCA CGCCTTACAA
CTGATAGATC AACTCGATCC CAACATGTGC CGCCTTAAAG TGGGCAAAGA AATGTTCACC
CTGTTTGGCC CACAATTGGT GAAAGATATT CACGACCGTG GTTTCGATCT TTTCCTCGAC
TTAAAGTTTC ACGATATTCC TAATACGGTC GCCAAAGCGG TCGCGGCCGC GGCAGAACTG
GGCGTGTGGA TGACAAACGT GCATGCCAGC GGCGGCTTGG CCATGATGGA AGCGGCAAAA
AAAGCGTTGC TGCCCTATGG TAATGATGCG CCTATGCTAA TCGCAGTAAC GGTTCTCACT
TCCATGAGTG ATGAAGATTT AAAACTCATC GGCATTGATG TTCCTGCCTT TGAGCATGTG
CAACGTCTCG CGAAACTCAC CAAGCAGGCG GGCCTCGATG GTGTAGTCTG TTCGGCGCAA
GAGGCAAGCG TACTTAAATC ACTCTTAGGT CAAGATTTTA AACTTATCAC CCCGGGGATC
CGCCCTGTGG GCAGCGACGT GGGCGACCAA CACCGGGTGA TGACGCCATC GCAGGCGCTT
GCAGCCGGTT CTGATTATTT AGTGATTGGT CGACCAATCA CTAAGGCCGC CGACCCTCTG
GCTGCACTGC AGGCGATTCA TCAATCTCTA GCTTGA
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| Protein sequence | MTTKPILVAL DYDNKNHALQ LIDQLDPNMC RLKVGKEMFT LFGPQLVKDI HDRGFDLFLD
LKFHDIPNTV AKAVAAAAEL GVWMTNVHAS GGLAMMEAAK KALLPYGNDA PMLIAVTVLT
SMSDEDLKLI GIDVPAFEHV QRLAKLTKQA GLDGVVCSAQ EASVLKSLLG QDFKLITPGI
RPVGSDVGDQ HRVMTPSQAL AAGSDYLVIG RPITKAADPL AALQAIHQSL A
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