| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1917 |
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| Symbol | |
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| ID | 4252491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2284988 |
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| End bp | 2285662 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638118528 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_734048 |
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| Protein GI | 113970255 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0123365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000762533 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCTTAG CTGAGGTTAA AGGGGTCTTA TTCGACCTTG ACGGTACCCT TGCCGATACC
GCGCCGGATC TGGTTCAGGC CCTTAACCTC AGTTTGTCTG ATGTCGGTAT CGCGGCAAAA
CCTTTAGCTG ACATGCGTAG CGCCGCCTCC CATGGCAGCT TTGCCTTAGT CGATGCGGCG
ATTCCCGGCG CTGATGACGC ACTGCGCACT CAAGTACAGC AAGGACTCCT CGCCCACTAT
CAAAGGATCA ATGGCGACCA TTGCCAGTTG TTTGATGGTA TCGCTCCCCT GCTCGATTGG
CTCGAGTTAT GCCGCGTGCC GTTTGGAGTG ATCACCAATA AACCCGCCCG CTTTACTCGC
CCTCTATTGC ATAAGCTGAA GCTCAGCTCG CGTATGCCAG TGATGATCAG TGGCGATTCG
ACTCGTTTCC CTAAGCCCCA TACCGCACCT ATGCTATTGG GCGCGCAGCA GCTGCAGTGC
CATCCACAGC AAATCCTCTA TCTAGGGGAT GCGGAGCGGG ATTTACTCGC GGCTCAAGCG
GCGGGCATGC TCGGCGGTGT GGCCTTGTGG GGATATTTGA GTGAAGCCGA TACGCCCGAT
GCATGGCCTG CCTATGCGCA GTTTAACTCG CCATCGAGTT TGCATTCGGC CTTAAGCCAA
GCATTGGCCA AATAG
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| Protein sequence | MSLAEVKGVL FDLDGTLADT APDLVQALNL SLSDVGIAAK PLADMRSAAS HGSFALVDAA
IPGADDALRT QVQQGLLAHY QRINGDHCQL FDGIAPLLDW LELCRVPFGV ITNKPARFTR
PLLHKLKLSS RMPVMISGDS TRFPKPHTAP MLLGAQQLQC HPQQILYLGD AERDLLAAQA
AGMLGGVALW GYLSEADTPD AWPAYAQFNS PSSLHSALSQ ALAK
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