Gene Shewmr4_1914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1914 
Symbol 
ID4252488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2280593 
End bp2281003 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content52% 
IMG OID638118525 
Productferredoxin 
Protein accessionYP_734045 
Protein GI113970252 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.318435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000631262 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTAAAT CGAACCTGCT GTTAAACAAC CCCTTTGCGA AGGCGCCCAT TGTGCGCCTT 
CAAGGGCAAC CTGTGCTGCT GTTTACCGAA CAGCACAATT CGTTGTTGCA AGCACTCGAA
GCCAAAAAAG TGACCATTTT CTCTGAGTGC CGCAGTGGTT TTTGCGGCGC TTGCAAGACC
CGTATTATTA GCGGCAGCGT CAGCTATTTA ACCGAGCCTT TGGCCGAGCT TAATGCCGAC
GAATGTCTGC CCTGCTGCTG TATTCCTAGC GAAGATTTAG AACTCGATTT ATCCCCCGAA
GGTGCTGCCG TGGTGACCTA TGCTTGCGGT AACACTCGCG CCCAAACCCC ATCGACGCGT
AAAACCGCCA ATCTCAAAGC TGTGCCACAG CAAGAAGTGG TCGAAGACTA G
 
Protein sequence
MAKSNLLLNN PFAKAPIVRL QGQPVLLFTE QHNSLLQALE AKKVTIFSEC RSGFCGACKT 
RIISGSVSYL TEPLAELNAD ECLPCCCIPS EDLELDLSPE GAAVVTYACG NTRAQTPSTR
KTANLKAVPQ QEVVED