| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1898 |
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| Symbol | aspS |
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| ID | 4252472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2261738 |
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| End bp | 2263513 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638118509 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_734029 |
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| Protein GI | 113970236 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0452698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00737788 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCAGTC ATTATTGTGG AGACGTCAAT AAGTCTCACG TTGGACAAGA AGTTACCTTG
GTAGGTTGGG TTAATCGTAG CCGTGATTTG GGTGGCGTGG TCTTTTTAGA TTTAAGAGAC
AGAGAAGGTC TGGTCCAAGT GGTTTACGAT CCAGATTTAC CTGAGGTCTT TAATGTTGCC
AGTACGCTGC GCGCCGAGTT TTGTGTTCAG GTCAAAGGTC TCGTGCGTGC CCGTCCTAAT
AGCCAAGTTA ACGCGCAAAT GAAGACCGGC GAAATTGAAG TATTAGGTAA AGAACTGACG
ATCATCAATA GTTCTGAGCC GCTGCCGCTG AGCTTAGATA ACTATCAAAA CAACAGTGAA
GAGCAGCGTC TAAAGTACCG TTATTTAGAT TTACGTCGCC CAGAAATGGC GCAGCGCTTA
ATGTTCCGCG CGAAAGTGAC CAGTGCTGTG CGTCGTTTCC TCGACTCAAA CGGCTTCTTA
GATATCGAAA CGCCTATTCT GACTAAGGCG ACGCCAGAAG GTGCACGTGA CTATTTAGTG
CCAAGCCGCA CTTACAAAGG TCAATTCTTC GCGCTGCCAC AATCACCACA GCTGTTTAAA
CAGTTACTGA TGATGTCAGG CTTTGATCGT TACTATCAAA TCGTAAAATG CTTCCGTGAC
GAAGACTTAC GTGCTGACCG TCAGCCAGAA TTTACTCAAA TCGATATCGA AACTTCATTT
ATGACGTCTG AGCAGGTGAT GGCTAAGACC GAAGAAATGA TGCGTGGTCT GTTCCTTGAG
ATGCTGAACG TCGATTTAGG CGAATTCCCA CGTATGACCT ATAACGAAGC CATGCGTCGT
TTCGGTTCAG ATAAGCCTGA TTTACGTAAC CCATTAGAAC TGGTTGACGT AGCTGACTTG
CTCAAAGAAG TGGAGTTTGC GGTATTCTCA GGCCCAGCTA ATGACGAAGA AGGTCGTGTT
GCGGCCCTGC GTATTCCAGG TGGCGCGAGC TTATCCCGTA AGCAAATCGA TGATTACACT
AAGTTTGTCG GTATATACGG TGCTAAAGGT TTAGCGTGGA TGAAGCTAAA CGACCTTACT
CAAGGCTTAG AAGGCATTCA ATCACCTGTG CTCAAGTTCT TGAACGAAGA CATTGTGAAC
GAAATCATCA GCCGCACTGG CGCACAAACT GGCGATATCA TCCTGTTTGG TGCCGATAAC
GCGACTGTGG TTGCTGAATC TATGGGCGCA CTGCGTCTAA AAGCCGGTGA AGACTTTAAC
CTGCTCGAAG GTCAATGGCG TCCACTGTGG GTGGTTGACT TCCCAATGTT TGAGAAGATC
AACGGCAGCT TCCACGCGGT TCACCATCCG TTTACTGCGC CACGCGGCGT GACACCACAA
GAGCTGGAAG CCAATCCGGC TAACCGTGTG TCAGATGCCT ACGACATGGT ATTAAACGGC
TGTGAATTAG GTGGTGGTTC AGTTCGTATC CACAACCAAG AGATGCAATC TGCGGTATTC
CGTATCCTTG GCATTACTGA TGAAGAAGCG AAAGAGAAAT TCGGCTTCTT ACTCGAAGCG
CTGCGCTACG GTACGCCACC ACATGCGGGT CTGGCATTCG GTTTAGACCG TATTATCATG
CTGATGACGG GCGCAAGCTC AATCCGTGAT GTGATGGCTT TCCCGAAAAC CACCACTGCT
GCGTGTCCGT TAACCAATGC TCCAGGTTTT GCTAACCCAC AACAATTAGC TGAACTAGGT
ATTTCCGTGG TGAAAGCCGC GAAGACTGAA GACTAA
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| Protein sequence | MRSHYCGDVN KSHVGQEVTL VGWVNRSRDL GGVVFLDLRD REGLVQVVYD PDLPEVFNVA
STLRAEFCVQ VKGLVRARPN SQVNAQMKTG EIEVLGKELT IINSSEPLPL SLDNYQNNSE
EQRLKYRYLD LRRPEMAQRL MFRAKVTSAV RRFLDSNGFL DIETPILTKA TPEGARDYLV
PSRTYKGQFF ALPQSPQLFK QLLMMSGFDR YYQIVKCFRD EDLRADRQPE FTQIDIETSF
MTSEQVMAKT EEMMRGLFLE MLNVDLGEFP RMTYNEAMRR FGSDKPDLRN PLELVDVADL
LKEVEFAVFS GPANDEEGRV AALRIPGGAS LSRKQIDDYT KFVGIYGAKG LAWMKLNDLT
QGLEGIQSPV LKFLNEDIVN EIISRTGAQT GDIILFGADN ATVVAESMGA LRLKAGEDFN
LLEGQWRPLW VVDFPMFEKI NGSFHAVHHP FTAPRGVTPQ ELEANPANRV SDAYDMVLNG
CELGGGSVRI HNQEMQSAVF RILGITDEEA KEKFGFLLEA LRYGTPPHAG LAFGLDRIIM
LMTGASSIRD VMAFPKTTTA ACPLTNAPGF ANPQQLAELG ISVVKAAKTE D
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