| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1895 |
|---|
| Symbol | |
|---|
| ID | 4252469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 2256871 |
|---|
| End bp | 2257863 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638118506 |
|---|
| Product | putative methyltransferase |
|---|
| Protein accession | YP_734026 |
|---|
| Protein GI | 113970233 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
|---|
| TIGRFAM ID | [TIGR00452] methyltransferase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.175832 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCAGTT TCAGCTCCTT TTACCAACAA ATTGCCGATT CCAATTTGCA GCATTGGCTC
GAGACTTTGC CAGCCATTCT CGGCAAATGG CAAAGAGAAC ATAAGCACGG CAACTTACCC
AAGTGGGAAA AAGTGCTCAA TAAGCTGCAC TATCCTGCCC CAGATCGCGT TGACTTTGTC
AGCAGCGTGA CCGTCGGCAC TGGCGAGCAA CTCACGCCCG GCGAAAAGGA AAAGCTTGAG
AACCTACTGC GCTTGTTTAT GCCTTGGCGC AAAGGCCCTT TCCATATCCA CGGCATTCAT
ATCGATACCG AATGGCGCAG CGATTGGAAG TGGGATCGCG TGAGCCCGCA TATTTCTCCT
TTGCAAAACC GCACTGTGCT CGATGTCGGC TGTGGCAGCG GTTATCACAT GTGGCGCATG
CTTGGTGCGG GCGCAAAACG CGTGGTGGGC ATCGACCCTT CGCCATTGTT TTTATGCCAA
TTCGAAGCCG TTAAACGCCT AAGTGGTGAA AATCACCCGG TACACTTACT GCCACTTGGC
ATTGAAGAGC TGCCACCACT GGATGCATTC GATACGGTTT TCTCCATGGG CGTCTTGTAT
CACAGACGTT CGCCTATTGA TCACTTGTTA CAATTACGTG ATCAGTTACG TATGGGTGGG
GAATTAGTGT TAGAGACTTT GGTAATAGAT GGTGATGAAA ACGCCGTACT CGTCCCTCAA
GATAGATATG GGAAAATGAA TAATGTATGG TTTATTCCAT CCGTCGCGGC CCTGATGCTC
TGGCTAAAGA AGTGTGATTT CACAGACATA CGTTGTGTCG ACACCGATGT CACCGCATTA
GCCGAACAGC GCCGAACCGA TTGGATGCCG AATGAGTCAC TGGTTGAATA TCTTGACCCT
AACGATATCA CTAAGACTAT CGAGGGTTAC CCCGCGCCGA AACGCGCAAC GATTATTGCG
GTGAAAAATC AACCCAATCA AGATTTGACC TAA
|
|---|
| Protein sequence | MISFSSFYQQ IADSNLQHWL ETLPAILGKW QREHKHGNLP KWEKVLNKLH YPAPDRVDFV
SSVTVGTGEQ LTPGEKEKLE NLLRLFMPWR KGPFHIHGIH IDTEWRSDWK WDRVSPHISP
LQNRTVLDVG CGSGYHMWRM LGAGAKRVVG IDPSPLFLCQ FEAVKRLSGE NHPVHLLPLG
IEELPPLDAF DTVFSMGVLY HRRSPIDHLL QLRDQLRMGG ELVLETLVID GDENAVLVPQ
DRYGKMNNVW FIPSVAALML WLKKCDFTDI RCVDTDVTAL AEQRRTDWMP NESLVEYLDP
NDITKTIEGY PAPKRATIIA VKNQPNQDLT
|
|---|
| |