| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1893 |
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| Symbol | |
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| ID | 4252467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2254304 |
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| End bp | 2255812 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638118504 |
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| Product | gonadoliberin III-related protein |
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| Protein accession | YP_734024 |
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| Protein GI | 113970231 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.670166 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTCAC GTAAACCTTT TTACATTTTG GTGGCATTAC TTTTTATTGT CGGTTTAAGC
GCCAGTATCT ACCGCGGCGT TAAGCATCAG GTGCCTTTTC TCCCCGGCGA GCAAGTTCAA
AGCTGGGCGG TTGACGCCAA GATAAGCTTC GATGGCACAG GGGATGCGGC CGAAGTGTCC
TTCTCTTTAC CACAGGATCC CGCCTATGAA GTCTTGGTCG AGAACGCCAG CTCCCCAGGC
TTTGGGCTGT CACTGAGTGA TGATAAAGAC GCGCGCCGCG CAATTTGGTC TATTCGTGAG
GCCTATGGCA GCCAAGATCT CTATTATAAA GTGACCCTAG TGCCGACGGG TGTGACCCAA
ATCCACAGCG ACGATATCCC AAGTCAGCCG GAACCTTACC TCTGGCCCGC GACCGAGAAG
ACCGCTGCAG AGCAAGTAAT TAACGAAACC TGGGCGCGCA GCGCATCGAA CTTGTCCTTC
GCCCAGCAAT TAATGAATGC AATCACGGCC ACTAAGCGTA GCCAGAATAT GGAGCTGTTG
TTATCGAGCC AAACCGCGAC GCAAGTGTTT TTGCATATGC TGCAAACTAA GGGCATTCCC
GCCCGTGAAG TCAGCGGACT CTACCTTGAA GATCAGCGCC GCCGCCAATC CCTCTCGCCC
TTTGTGGAAG TGTTCCATAA CGGCGGGTGG GTCTTGTTCG ATTTAGTTAA AGGCAAGCAA
GGCCGACCAG AGAACTTACT GCTGTGGGAA CGTTCGGGCC ATTCCGTGCT CGATGTGATG
GGCGGCGTGA ACTCGCAGGT GCATTTCTCG ATGTTGCAAG ACACCCGCTC GGCATTAGCG
ACATCCATCG ATATGATGAT GAATAACAAT GCCTTGGATT TTTCACTCTA CCAATTACCG
CTAGAAGAAC AGAGTCTATT CAAGGGCATT TTATTGATCC CTATCGGGGT GCTGATGGTG
GTGTTTTTAC GGGTGATCAT TGGGGTGAAA ACCTCGGGCA CCTTTATGCC AGTCCTTATC
GCCCTCGCCT TTATTCAAAC CAGTTTAGTC ACGGGCTTAG TCGGCTTCTT ACTGATCGTG
GCCTGCGGCC TAATGATCCG TTCTTATTTA TCCCAATTAA ATCTGTTGCT GATCTCGCGA
ATATCGGCGG TGATCATCGT CGTTATCGGC ATTATCGGTG TCTTTACCTT GCTCTCCTAT
AAGTTCGGTT TAAGCGAAGG ACTGACGATT ACCTTCTTCC CGATGATTAT TTTGGCGTGG
ACCATCGAAC GTATGTCTAT TCTGTGGGAA GAAGAAGGCC CGAAAGAAGT GATAGTGCAA
GGCGGTGGCA GCCTAATGGT CGCCACCCTC GCCTACTTAG CCATGAGCGC CAGTTGGGTA
CAACACTGGG TATTTAACTT CCTTGGGCTC CACTTAGTGA TCTTGGCCTT AGTGCTATTA
ATGGGCCAAT ACACAGGTTA TCGCCTACTG GAACTCAAAC GCTTTAAACC ACTCGCGGGG
GATGCCTAA
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| Protein sequence | MHSRKPFYIL VALLFIVGLS ASIYRGVKHQ VPFLPGEQVQ SWAVDAKISF DGTGDAAEVS
FSLPQDPAYE VLVENASSPG FGLSLSDDKD ARRAIWSIRE AYGSQDLYYK VTLVPTGVTQ
IHSDDIPSQP EPYLWPATEK TAAEQVINET WARSASNLSF AQQLMNAITA TKRSQNMELL
LSSQTATQVF LHMLQTKGIP AREVSGLYLE DQRRRQSLSP FVEVFHNGGW VLFDLVKGKQ
GRPENLLLWE RSGHSVLDVM GGVNSQVHFS MLQDTRSALA TSIDMMMNNN ALDFSLYQLP
LEEQSLFKGI LLIPIGVLMV VFLRVIIGVK TSGTFMPVLI ALAFIQTSLV TGLVGFLLIV
ACGLMIRSYL SQLNLLLISR ISAVIIVVIG IIGVFTLLSY KFGLSEGLTI TFFPMIILAW
TIERMSILWE EEGPKEVIVQ GGGSLMVATL AYLAMSASWV QHWVFNFLGL HLVILALVLL
MGQYTGYRLL ELKRFKPLAG DA
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