| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1892 |
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| Symbol | |
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| ID | 4252466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2253360 |
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| End bp | 2254304 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118503 |
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| Product | alpha-L-glutamate ligase-like protein |
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| Protein accession | YP_734023 |
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| Protein GI | 113970230 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | [TIGR02291] alpha-L-glutamate ligase-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.958172 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTG CTTGGCCATG GGAGCTTCGC GCGCGCGGCG TGCTCAATAT GAATAAGCGC
AATATCGATT ACATTGGTCG CTATAATCCG CGTAAATTTT ATAAACGAGT GGACGATAAA
CTGCTGACTA AACAGTTAGC ACTGGCCAAT GATATTGCCG TGCCCGATTT AATCGCCGTT
GTGCGTGAGC AGCACGAAAT CGTGCATATT CCCGAGCGCG TTAAGGACCG CACAGGGTTT
GTGATCAAAC CTGCCAAGGG CTCTGGTGGT AAAGGCATTT TAGTGATCAC CCATATCGAA
CAGGGACGTT ACTATAAACC CAGCGGGCAT GAAGTCAGCC CATCGGAATT GGATAGACAC
GTGTCCAATA TCCTCAGCGG TTTATTCTCC CTTGGCGGCA AACCCGATGT GGCGATTGTC
GAGGGACTGA TTGAATTCGA TCCTGTGTTT GATGGTTACA GCCATGAAGG CGTGCCCGAT
ATCCGCTTGA TTGTCTTTAA AGGTTTTCCG GTGATGGGAA TGCTCAGGCT CTCCACCGCA
GCCTCCGATG GTAAGGCCAA TTTGCACCAA GGCGCCGTAG GTGTGGGCGT TGACATTGCC
ACGGGAAAAG GGTTACATGC TGTGCAATTT GATGCTCCAA TTGAGTTTCA TCCAGACACA
GGCAAAAAAC TCACCGATAT CGTCGTCCCC CATTGGGACA GCTTGCTGCA TACCGCATCG
AGCGCATATG AAATGTGTGA GATGGGTTAT TTAGGCACAG ATATGGTGCT TGATCAGACT
AAAGGCCCGC TGTTATTGGA ACTCAATGCA CGCCCGGGAC TGGCGATCCA GATTGCAAAT
GGAAAAGGCA TTTTGCCTAG ACTTAAGCAT GTCGAAGCCA TGTCATCCCA TTCAATGACA
GTTGCAGAAC GTGTAGCCTA TGCAAAAATC CATTTTAACG GCTAG
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| Protein sequence | MNIAWPWELR ARGVLNMNKR NIDYIGRYNP RKFYKRVDDK LLTKQLALAN DIAVPDLIAV
VREQHEIVHI PERVKDRTGF VIKPAKGSGG KGILVITHIE QGRYYKPSGH EVSPSELDRH
VSNILSGLFS LGGKPDVAIV EGLIEFDPVF DGYSHEGVPD IRLIVFKGFP VMGMLRLSTA
ASDGKANLHQ GAVGVGVDIA TGKGLHAVQF DAPIEFHPDT GKKLTDIVVP HWDSLLHTAS
SAYEMCEMGY LGTDMVLDQT KGPLLLELNA RPGLAIQIAN GKGILPRLKH VEAMSSHSMT
VAERVAYAKI HFNG
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