Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1877 |
Symbol | |
ID | 4252451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2235508 |
End bp | 2236350 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638118488 |
Product | hypothetical protein |
Protein accession | YP_734008 |
Protein GI | 113970215 |
COG category | [R] General function prediction only |
COG ID | [COG2384] Predicted SAM-dependent methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.591711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAATCA GTCAGCGATT ACAGCAGATC AATCAGATGG TGGGGCCGGG GTACGATCAT ATCTGGGACT GCTGCTGCGA TCATGGCTTA CTCGGCATGC TGTTACTGCA AAGAAATGCC GCACCTAAGG TGCATTTTGT CGATTGTGTC GCGCCCTTGA TGCAGCAACT CAGTCTTGAG TTAGCAAGGT TTTTCCCTCC GTTACCAATC TCAAACGTTC AAAATGCAAC TGAGCAAACC ACAACTGAGC AAACCACCCA TGCCCAGAGT GAATGGCAAG TGCATTGCCT CGATGTGGCG GCCTTGCCAC TGGCGCAATA CGGCAAGCAA GCCAAACACT TAGTAATTAT TGCGGGTGTC GGTGGTGAGT TATTGGTTAA ATTGGTGCGC AGTATTGTGG CGAATCAGCA AAGTCAAAGT GATGCTCACA GTGGAAATGA TTCGAGTAAT CATGACCTTA GTCAAGGCGC CCGCCAGCTC GAATTTATTT TGTGTCCCGT GCATCATCAT TACCATGTGC GCAGCGCGTT GGCGGAATTG GGCTTATCCC TTAAAGATGA ATATTTACTC GAAGAAAACC AACGTTTCTA CGAGATACTG CATTTAACTC AGGCAAATGC CAGCTCAAAG ACGAATACCT GCTCAAAAAT AACTGAAGCT GTGCCCTTAA GTGCGACGGG CTCAATCATG TGGCAAGGGT TAGATGCGGA TAAAACCCGT CAGGCCAAGC GTTATCTTGA CCAAACCATA GGTCATTATC AGCGTATTCC TGAGCATCGT ATGCCCAACA AACCCCAAAT TGTGGCGGCC TATCAGCACA TTTTGCAGCA ACTGAATTGT TAA
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Protein sequence | MKISQRLQQI NQMVGPGYDH IWDCCCDHGL LGMLLLQRNA APKVHFVDCV APLMQQLSLE LARFFPPLPI SNVQNATEQT TTEQTTHAQS EWQVHCLDVA ALPLAQYGKQ AKHLVIIAGV GGELLVKLVR SIVANQQSQS DAHSGNDSSN HDLSQGARQL EFILCPVHHH YHVRSALAEL GLSLKDEYLL EENQRFYEIL HLTQANASSK TNTCSKITEA VPLSATGSIM WQGLDADKTR QAKRYLDQTI GHYQRIPEHR MPNKPQIVAA YQHILQQLNC
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