Gene Shewmr4_1877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1877 
Symbol 
ID4252451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2235508 
End bp2236350 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content48% 
IMG OID638118488 
Producthypothetical protein 
Protein accessionYP_734008 
Protein GI113970215 
COG category[R] General function prediction only 
COG ID[COG2384] Predicted SAM-dependent methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.591711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAATCA GTCAGCGATT ACAGCAGATC AATCAGATGG TGGGGCCGGG GTACGATCAT 
ATCTGGGACT GCTGCTGCGA TCATGGCTTA CTCGGCATGC TGTTACTGCA AAGAAATGCC
GCACCTAAGG TGCATTTTGT CGATTGTGTC GCGCCCTTGA TGCAGCAACT CAGTCTTGAG
TTAGCAAGGT TTTTCCCTCC GTTACCAATC TCAAACGTTC AAAATGCAAC TGAGCAAACC
ACAACTGAGC AAACCACCCA TGCCCAGAGT GAATGGCAAG TGCATTGCCT CGATGTGGCG
GCCTTGCCAC TGGCGCAATA CGGCAAGCAA GCCAAACACT TAGTAATTAT TGCGGGTGTC
GGTGGTGAGT TATTGGTTAA ATTGGTGCGC AGTATTGTGG CGAATCAGCA AAGTCAAAGT
GATGCTCACA GTGGAAATGA TTCGAGTAAT CATGACCTTA GTCAAGGCGC CCGCCAGCTC
GAATTTATTT TGTGTCCCGT GCATCATCAT TACCATGTGC GCAGCGCGTT GGCGGAATTG
GGCTTATCCC TTAAAGATGA ATATTTACTC GAAGAAAACC AACGTTTCTA CGAGATACTG
CATTTAACTC AGGCAAATGC CAGCTCAAAG ACGAATACCT GCTCAAAAAT AACTGAAGCT
GTGCCCTTAA GTGCGACGGG CTCAATCATG TGGCAAGGGT TAGATGCGGA TAAAACCCGT
CAGGCCAAGC GTTATCTTGA CCAAACCATA GGTCATTATC AGCGTATTCC TGAGCATCGT
ATGCCCAACA AACCCCAAAT TGTGGCGGCC TATCAGCACA TTTTGCAGCA ACTGAATTGT
TAA
 
Protein sequence
MKISQRLQQI NQMVGPGYDH IWDCCCDHGL LGMLLLQRNA APKVHFVDCV APLMQQLSLE 
LARFFPPLPI SNVQNATEQT TTEQTTHAQS EWQVHCLDVA ALPLAQYGKQ AKHLVIIAGV
GGELLVKLVR SIVANQQSQS DAHSGNDSSN HDLSQGARQL EFILCPVHHH YHVRSALAEL
GLSLKDEYLL EENQRFYEIL HLTQANASSK TNTCSKITEA VPLSATGSIM WQGLDADKTR
QAKRYLDQTI GHYQRIPEHR MPNKPQIVAA YQHILQQLNC