| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1870 |
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| Symbol | |
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| ID | 4252444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2226513 |
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| End bp | 2228108 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638118481 |
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| Product | major facilitator transporter |
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| Protein accession | YP_734001 |
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| Protein GI | 113970208 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCGG ATCAACAAAC GGTTACCCCA TTAGAGAATT TCTCGCCCAA GGTGGCGCAG
CGCGCCGTGC ATAGGGTGCA ACCCGAGCTG AATTTCTGGC AAATCTTTAA TATGTGCTTT
GGCTTTTTGG GGATCCAATT CGGCTTTGCG CTGCAAAATG CCAACGTCAG CCGCATTTTC
CAAACCCTTG GCGCCTCTAT CGATGATATT CCGATCCTGT GGATTGCCGC GCCGTTAACG
GGTCTGCTGG TTCAACCTAT TATTGGTTAT CTGAGCGATA ACACTTGGGG GCGTTTAGGT
CGCCGCCGGC CGTATTTTTT AATCGGCGCC ATTTGTACGA CTCTCGCCAT TTTTGTGATG
CCGCATTCCC CTACGTTGTG GATTGCCGCG GGCATGCTGT GGATTATGGA TGCTTCAATC
AATATCGCCA TGGAACCCTT CCGTGCCTTT GTGGGGGATA ATTTACCTCC TAAGCAGCGC
ACCCAAGGCT ATGCGATGCA AAGCTTTTTT ATCGGCATCG GCGCGGTTGT GGCCTCGGCC
CTACCCTATA TTCTCAGCAA CTTCTTTGCT GTCGCCAATA CCGCACCCGC GGGCGAAATA
GCCGATTCGG TGCGTTATGC CTTCTATTTT GGTGGCGCAG TGCTGTTTCT TAGCGTGGCT
TGGACTGTTG TGTCCACCAA AGAATATTCC CCCGATGAAC TCGCCGCCTT CCATGGCAAT
GCTGACGCAG GCATAGATGA GCAACAAAAC CGCACACGCA CCCATAAGAA TTATCAATCT
GCCGCTATCG TTTGGATGGC TGTAGGCGCA CTGCTGACGC TTGCGGTGTG GACACAGGAT
TTAGATAAGC AGCTGTATAT TTTAACCTTA GGGATTTTTG CCTTTGGCCC ATTGCAACTT
TACTGCGCCC TGCGTTTAGG CAAATCTTCG CCCTCACAGC GCGCGCAACT GGGCATTGTC
TTTAATGTGG TCGATGATTT ATTCCATATG CCTAAGGCCA TGCATCAGTT AGCCATAGTG
CAGTTTTTCT CTTGGTTCGC GCTCTTTGCG ATGTGGATTT ACACCACTTC AGCGGTCACG
TCCTACCATT TTGGCAGCAG CGATGTGTTA TCTAAGGCCT ATAACGATGG CGCCGATTGG
GTGGGCGTAC TGTTCGCCTC CTACAATGGA TTTTCGGCCA TTGCGGCTCT GTTTATCCCA
CTGCTTGCTA AACGTATCGG CATCAAACTG ACCCACACCT TTAATATGTT CTGCGGCGGT
TTTGGGTTGA TCAGTTTCTA TTTTATCAAA GATCCCAGTC TGTTATGGCT ACCCATGATT
GGCGTGGGTA TCGCCTGGGC CTCGATTCTC TCCGTGCCCT ACGCCATGTT ATCTGGCGCC
TTACCGCCGA AAAAGATGGG CGTGTATATG GGGATTTTTA ACTTCTTTAT CGTGATCCCA
CAGCTGCTCG CAGCCAGTGT TTTAGGCTTA ATTCTTAATG GATTATTTGA TGGTCAGCCC
ATCTATGCCC TTATCACTGG CGGCGTCCTG ATGCTCTGCG CCGGGATTGC CGTGCTCTTT
GTTGAGCAAC CGAATACTCA GCACACTCAA GCGTAA
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| Protein sequence | MSADQQTVTP LENFSPKVAQ RAVHRVQPEL NFWQIFNMCF GFLGIQFGFA LQNANVSRIF
QTLGASIDDI PILWIAAPLT GLLVQPIIGY LSDNTWGRLG RRRPYFLIGA ICTTLAIFVM
PHSPTLWIAA GMLWIMDASI NIAMEPFRAF VGDNLPPKQR TQGYAMQSFF IGIGAVVASA
LPYILSNFFA VANTAPAGEI ADSVRYAFYF GGAVLFLSVA WTVVSTKEYS PDELAAFHGN
ADAGIDEQQN RTRTHKNYQS AAIVWMAVGA LLTLAVWTQD LDKQLYILTL GIFAFGPLQL
YCALRLGKSS PSQRAQLGIV FNVVDDLFHM PKAMHQLAIV QFFSWFALFA MWIYTTSAVT
SYHFGSSDVL SKAYNDGADW VGVLFASYNG FSAIAALFIP LLAKRIGIKL THTFNMFCGG
FGLISFYFIK DPSLLWLPMI GVGIAWASIL SVPYAMLSGA LPPKKMGVYM GIFNFFIVIP
QLLAASVLGL ILNGLFDGQP IYALITGGVL MLCAGIAVLF VEQPNTQHTQ A
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