| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1868 |
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| Symbol | |
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| ID | 4252442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2222854 |
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| End bp | 2223666 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638118479 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_733999 |
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| Protein GI | 113970206 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.598218 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGATG TTATTTCTAA AGCGACAATG TTGGCACCCA GCCAATTTGC GTTCACGTTA
GATGCAAATC GTCCCGTATT GAGTAATGCG CGCAATCTCG AGGCCGAAAT GGGCGTTGAA
CCCCATTCTC ACCCTCGGGG GCAGTTACTT TGGGCGGCAA AAGGGATTTT ACGGGTACAG
AGCGACAATG CGGTTTGGGT GGTGCCATCG ACCCATGCCG TGTGGCTCCC CAGTGGTTGC
CGACATCAAA TTAACTGCGA AACCCATGCT CATCTTCGCA ACTTGTATAT CGATCCCAGT
TATCGCGTTA GAGTGCAGGA CACGCAGGTG GTGATGGTTA CTATGACGCC GCTAATGCGC
GAAATGGTGC TGAAGCTATG TCAAAACACC TCGATGGAGC CCGCAAAGTA TTTCCGCTTG
GGTTTAAGTG CCATTGACGA GCTAGATACA CTCGACAGTG TGAATACCTA TCTGAATGCG
GGCTCGGATC CGCGTCTTGG CCGAGTGATC CAACTGTTGA TCAAAAAACC GCAGGCAGAA
TATACCTTGG CCGAATTAGC CCAAGGCGCG GGGGCGAGTA TCAGAACCAT TGAACGACTC
TTTAAAGCCG AAACCGGACA GACCTATAGA CAATGGCGCC AAAGGTATCG ATTACTCAAC
TCCCTTGAGC GGTTAACCCA AGGGGAGAGC ACGACGGGCG TGGCCCATAG TCTGGGGTAT
TTGAGTGTCA GTAGCTTTAG CGCAGCATTT AAAGCCTTAT TTGGTTGCAC GCCTCAGGAA
TACGCCCAAA AAAGCGTGCA AGCCACGCGG TAG
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| Protein sequence | MSDVISKATM LAPSQFAFTL DANRPVLSNA RNLEAEMGVE PHSHPRGQLL WAAKGILRVQ
SDNAVWVVPS THAVWLPSGC RHQINCETHA HLRNLYIDPS YRVRVQDTQV VMVTMTPLMR
EMVLKLCQNT SMEPAKYFRL GLSAIDELDT LDSVNTYLNA GSDPRLGRVI QLLIKKPQAE
YTLAELAQGA GASIRTIERL FKAETGQTYR QWRQRYRLLN SLERLTQGES TTGVAHSLGY
LSVSSFSAAF KALFGCTPQE YAQKSVQATR
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