Gene Shewmr4_1866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1866 
Symbol 
ID4252440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2220636 
End bp2221229 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content48% 
IMG OID638118477 
Producthypothetical protein 
Protein accessionYP_733997 
Protein GI113970204 
COG category[S] Function unknown 
COG ID[COG3009] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.235297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATTT TAGTGTTATT TATTGTATTT TTGATGGCGG GCTGTAGCAG TCAGCCCGCA 
CCTAAAACCT ATTTTATTGC CCTGCAACAT ACAACAGATC CCGGTCTTAT AAGTCCTGAT
ATGGGTTCTG GCGGCCTGTG CTCGCTAGCT GTTAATCGGG TGAACTTAGC TGACTACCTC
AATACCAATG GTTTGCTCTA TCAAACCTCA CCACAGGAGT TAGTCGTAGC GAGGCAGCAT
TTATGGGCGG GCTCTCTGGC CGAGCAAATC CAATTTAGGT TAAACAATTT GCTAAGCCAG
CCATGCAGTG TGCCCGCTAC CTGGACCTTA TCAACAGATG AGCCGACTAA ATTAGGCCAA
CTCGACCTCA CAGTGACTGA ATTTTATGGC AGCTATACGG GTGAGGCTGT TGTGGGTGGA
CAGTGGCGCC TGATGGATAA GATGCAGCAA GTGCTGCTTG AACAGCCATT CCAATATCGG
ATTGCTTTGC CTGAAGAAGG CTATACCGCT CTTGTCAGCA GCATGGATAA AGGCTTGATA
CAGCTTGCTG ATGATATTCG CTTAATGGCG GCGCAGCATA CGCCTGCTCA GTAA
 
Protein sequence
MRILVLFIVF LMAGCSSQPA PKTYFIALQH TTDPGLISPD MGSGGLCSLA VNRVNLADYL 
NTNGLLYQTS PQELVVARQH LWAGSLAEQI QFRLNNLLSQ PCSVPATWTL STDEPTKLGQ
LDLTVTEFYG SYTGEAVVGG QWRLMDKMQQ VLLEQPFQYR IALPEEGYTA LVSSMDKGLI
QLADDIRLMA AQHTPAQ