Gene Shewmr4_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1858 
Symbol 
ID4252432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2206560 
End bp2206964 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content47% 
IMG OID638118469 
Producthypothetical protein 
Protein accessionYP_733989 
Protein GI113970196 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1393] Arsenate reductase and related proteins, glutaredoxin family 
TIGRFAM ID[TIGR01617] transcriptional regulator, Spx/MgsR family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000117045 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCACAAT GCGAGCAAAA TCAATGCGTG CCAACGGCGC CCCTCGATAG GAGCATCATC 
TTGACCCTTT TTGGTATTAA AAATTGCGAT ACAGTGCGTA AAGCACGTAA ATGGATTCAA
ACCCATCAAC TTTCGGTCAA CTTCCATGAC TTTAGGGAAG ATGGATTAGC AGAAAAGGAT
CTTCAGCATT GGTGTCAAAT TGCAGGATGG GAAACCGTCT TTAACAAACG CAGTACCAGT
TTTCGCGCCT TGAGTGATGC AGATAAGGCC AATATCGACC AAGCCAAAGC CATTCAACTG
ATGCTCACTC ACCCGACGCT GATCAAGCGC CCTGTGCTGG TTGTGGGTGA ACAAGTGCTG
GTGGGCTTTA ACGAAGCCGA ATATAAGAAG GTCTTTTCCC TATGA
 
Protein sequence
MPQCEQNQCV PTAPLDRSII LTLFGIKNCD TVRKARKWIQ THQLSVNFHD FREDGLAEKD 
LQHWCQIAGW ETVFNKRSTS FRALSDADKA NIDQAKAIQL MLTHPTLIKR PVLVVGEQVL
VGFNEAEYKK VFSL