Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1858 |
Symbol | |
ID | 4252432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2206560 |
End bp | 2206964 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638118469 |
Product | hypothetical protein |
Protein accession | YP_733989 |
Protein GI | 113970196 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1393] Arsenate reductase and related proteins, glutaredoxin family |
TIGRFAM ID | [TIGR01617] transcriptional regulator, Spx/MgsR family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000117045 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCACAAT GCGAGCAAAA TCAATGCGTG CCAACGGCGC CCCTCGATAG GAGCATCATC TTGACCCTTT TTGGTATTAA AAATTGCGAT ACAGTGCGTA AAGCACGTAA ATGGATTCAA ACCCATCAAC TTTCGGTCAA CTTCCATGAC TTTAGGGAAG ATGGATTAGC AGAAAAGGAT CTTCAGCATT GGTGTCAAAT TGCAGGATGG GAAACCGTCT TTAACAAACG CAGTACCAGT TTTCGCGCCT TGAGTGATGC AGATAAGGCC AATATCGACC AAGCCAAAGC CATTCAACTG ATGCTCACTC ACCCGACGCT GATCAAGCGC CCTGTGCTGG TTGTGGGTGA ACAAGTGCTG GTGGGCTTTA ACGAAGCCGA ATATAAGAAG GTCTTTTCCC TATGA
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Protein sequence | MPQCEQNQCV PTAPLDRSII LTLFGIKNCD TVRKARKWIQ THQLSVNFHD FREDGLAEKD LQHWCQIAGW ETVFNKRSTS FRALSDADKA NIDQAKAIQL MLTHPTLIKR PVLVVGEQVL VGFNEAEYKK VFSL
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