| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1844 |
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| Symbol | |
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| ID | 4252418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2193471 |
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| End bp | 2194058 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638118455 |
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| Product | periplasmic nitrate reductase subunit NapC |
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| Protein accession | YP_733975 |
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| Protein GI | 113970182 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
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| TIGRFAM ID | [TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.413955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000210051 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTAGAGA AACTTAAAAA GATCTGGAAA GTTCTCAATC GTCCGAGTGT GCACTACAGT
TTAGGGTTTT TAACCTTAGG TGGTTTTGTG GCGGGGGTGA TCTTCTGGGG GGGCTTTAAC
ACTGCGCTTG AAGCCACCAA CAAAGAAGCC TTCTGTATCG GTTGCCACGA AATGGAAAAT
AACGTCTATC AAGAGTTACA GTCGACTATC CATTTCACAA ACCGCAGTGG TGTGCGTGCG
ACTTGTCCTG ACTGCCACGT GCCGCACAAC TGGACCGATA AGATTGCCCG TAAGATGCAG
GCATCGAAAG AAGTGTGGGG TAAAGTGTTT GGTACCATCA ATACCCGCGA AAAGTTTGAA
AACAAACGTC GTGAGTTGGC CGAACATGAA TGGGAACGGT TAAAGGCAAA CGACTCGCTT
GAGTGCCGTA ACTGCCATAA CTTTACCTAT ATGGACTTTA CCAGACAGTC GCCACGCGCC
GCCCAAATGC ACTCGACATC TTTGGCCAGT GGTGAGAAAA CCTGTATCGA TTGCCATAAA
GGGATTGCTC ACCATCTTCC CGATATGGCA GGGGTTGAAG GCTTCTAG
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| Protein sequence | MLEKLKKIWK VLNRPSVHYS LGFLTLGGFV AGVIFWGGFN TALEATNKEA FCIGCHEMEN
NVYQELQSTI HFTNRSGVRA TCPDCHVPHN WTDKIARKMQ ASKEVWGKVF GTINTREKFE
NKRRELAEHE WERLKANDSL ECRNCHNFTY MDFTRQSPRA AQMHSTSLAS GEKTCIDCHK
GIAHHLPDMA GVEGF
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