Gene Shewmr4_1840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1840 
Symbol 
ID4252414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2190017 
End bp2190175 
Gene Length159 bp 
Protein Length52 aa 
Translation table11 
GC content47% 
IMG OID638118451 
Productperiplasmic nitrate reductase NapE 
Protein accessionYP_733971 
Protein GI113970178 
COG category[C] Energy production and conversion 
COG ID[COG4459] Periplasmic nitrate reductase system, NapE component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00661274 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGCTA ACAGCGCAGA AGAAAAATCC TTAGAACTGA AGATCTTTAT CTTTTTAACC 
GTATTTCTCG CCCCCCTCTT ATCCGTGTTG TTGGTAAGCG GGTTGGGATT CGCCATATGG
TTTAGTCAAA TTTTCACCGG CCCACCGGGG GCTGGTTGA
 
Protein sequence
MSANSAEEKS LELKIFIFLT VFLAPLLSVL LVSGLGFAIW FSQIFTGPPG AG