Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1837 |
Symbol | |
ID | 4252411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2183582 |
End bp | 2184613 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638118448 |
Product | peptidase T2, asparaginase 2 |
Protein accession | YP_733968 |
Protein GI | 113970175 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1446] Asparaginase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0107806 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAA AATTAGCCAC CTTTAGTTTA ATTCTCTCGA GTGCACTTTT TATGTCACAA AATACCCAAG CGAATGAAAA ACCTTTTGCC ATTGCGATCC ACGGTGGCGC TGGCACCATT TCTAAGGCCA ACCTCACGCC AGAGCTGCGT CAGGCCTATA AAGACAAGCT CAAAGAGGCG ATTGATAAAG GTTCAAAAGT GCTCGAGCAG GGCGGTGATA GCTTAGTCGC GGTGCAAACT GCTATCAATG TATTAGAAAA CAGCCCGCTG TTTAACGCCG GTGTCGGTTC GGTTTACACC TATGATGGCG GCCATGAATT AGATGCCTCG ATTATGGATG GTAAAACCAT GAATGCGGGC GCCGTAGCGG GCGTGCGCCA TATCGCCAAC CCCATCGATT TGGCCTTAGC CGTGATGAAT AAGTCTGAGC ATGTGATGCT GTCGGGCGCT GGCGCCGAGG AGTTTGCCTT AACCCAAGGT TTTAAACTGG TACCTAATAG CCATTTCGAT AGCGATGCCC GTTATCAACA ATTACTCGAT GCCAGACAAA AACTGCAGGC GGCTGAAAAA TCAGATCAAA TTGCGGGTAT TGAGATGAAA GATCTCGATT ATAAATTTGG TACCGTTGGT GCTGTCGCCT TAGATAAAAA CGGCAACTTA GCGGCGGGCA CTTCCACTGG TGGTATGACG GCCAAGCGTT TTGGTCGCAT TGGTGACTCG CCCGTGATTG GGGCGGGCAC CTATGCCGAA AACGGCGTTT GCGCTGTGTC GGCCACGGGC CACGGTGAGT TTTTTATTCG CTACCAAGTG GCGGGCGATA TCTGCGCTAA GGTCAAGTAC CAGCAAAAAT CCATTATTCA AGCGGCAGAT GAAGTGATTA ATCAACGCCT TATTACCGCT GGCGGCTCTG GTGGTGTGAT AGCAGTCGAC CACAGGGGCA ATATTGCCAC GCCATTTAAT ACCGAAGGCA TGTACCGCGC TACCCGTAGT AATGGCGAGC CTGCCCAAGT AATGATTTGG CAGGATCAAT AA
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Protein sequence | MKIKLATFSL ILSSALFMSQ NTQANEKPFA IAIHGGAGTI SKANLTPELR QAYKDKLKEA IDKGSKVLEQ GGDSLVAVQT AINVLENSPL FNAGVGSVYT YDGGHELDAS IMDGKTMNAG AVAGVRHIAN PIDLALAVMN KSEHVMLSGA GAEEFALTQG FKLVPNSHFD SDARYQQLLD ARQKLQAAEK SDQIAGIEMK DLDYKFGTVG AVALDKNGNL AAGTSTGGMT AKRFGRIGDS PVIGAGTYAE NGVCAVSATG HGEFFIRYQV AGDICAKVKY QQKSIIQAAD EVINQRLITA GGSGGVIAVD HRGNIATPFN TEGMYRATRS NGEPAQVMIW QDQ
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