Gene Shewmr4_1837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1837 
Symbol 
ID4252411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2183582 
End bp2184613 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content50% 
IMG OID638118448 
Productpeptidase T2, asparaginase 2 
Protein accessionYP_733968 
Protein GI113970175 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1446] Asparaginase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0107806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAA AATTAGCCAC CTTTAGTTTA ATTCTCTCGA GTGCACTTTT TATGTCACAA 
AATACCCAAG CGAATGAAAA ACCTTTTGCC ATTGCGATCC ACGGTGGCGC TGGCACCATT
TCTAAGGCCA ACCTCACGCC AGAGCTGCGT CAGGCCTATA AAGACAAGCT CAAAGAGGCG
ATTGATAAAG GTTCAAAAGT GCTCGAGCAG GGCGGTGATA GCTTAGTCGC GGTGCAAACT
GCTATCAATG TATTAGAAAA CAGCCCGCTG TTTAACGCCG GTGTCGGTTC GGTTTACACC
TATGATGGCG GCCATGAATT AGATGCCTCG ATTATGGATG GTAAAACCAT GAATGCGGGC
GCCGTAGCGG GCGTGCGCCA TATCGCCAAC CCCATCGATT TGGCCTTAGC CGTGATGAAT
AAGTCTGAGC ATGTGATGCT GTCGGGCGCT GGCGCCGAGG AGTTTGCCTT AACCCAAGGT
TTTAAACTGG TACCTAATAG CCATTTCGAT AGCGATGCCC GTTATCAACA ATTACTCGAT
GCCAGACAAA AACTGCAGGC GGCTGAAAAA TCAGATCAAA TTGCGGGTAT TGAGATGAAA
GATCTCGATT ATAAATTTGG TACCGTTGGT GCTGTCGCCT TAGATAAAAA CGGCAACTTA
GCGGCGGGCA CTTCCACTGG TGGTATGACG GCCAAGCGTT TTGGTCGCAT TGGTGACTCG
CCCGTGATTG GGGCGGGCAC CTATGCCGAA AACGGCGTTT GCGCTGTGTC GGCCACGGGC
CACGGTGAGT TTTTTATTCG CTACCAAGTG GCGGGCGATA TCTGCGCTAA GGTCAAGTAC
CAGCAAAAAT CCATTATTCA AGCGGCAGAT GAAGTGATTA ATCAACGCCT TATTACCGCT
GGCGGCTCTG GTGGTGTGAT AGCAGTCGAC CACAGGGGCA ATATTGCCAC GCCATTTAAT
ACCGAAGGCA TGTACCGCGC TACCCGTAGT AATGGCGAGC CTGCCCAAGT AATGATTTGG
CAGGATCAAT AA
 
Protein sequence
MKIKLATFSL ILSSALFMSQ NTQANEKPFA IAIHGGAGTI SKANLTPELR QAYKDKLKEA 
IDKGSKVLEQ GGDSLVAVQT AINVLENSPL FNAGVGSVYT YDGGHELDAS IMDGKTMNAG
AVAGVRHIAN PIDLALAVMN KSEHVMLSGA GAEEFALTQG FKLVPNSHFD SDARYQQLLD
ARQKLQAAEK SDQIAGIEMK DLDYKFGTVG AVALDKNGNL AAGTSTGGMT AKRFGRIGDS
PVIGAGTYAE NGVCAVSATG HGEFFIRYQV AGDICAKVKY QQKSIIQAAD EVINQRLITA
GGSGGVIAVD HRGNIATPFN TEGMYRATRS NGEPAQVMIW QDQ