| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1836 |
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| Symbol | |
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| ID | 4252410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2181605 |
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| End bp | 2183380 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638118447 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_733967 |
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| Protein GI | 113970174 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0488703 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCCG ATAACTTGTT AACGCTTTCA GTGAACGGGG TCGACGAAGC CCTAAAGCGT
AATATTCTCG CCCACTTAGG TGCTATGCCA GACTCCGAAG TGCAGCGCCG AGCCTTCTTA
TTTAACGTGG AAGACAATGT CTCCACCGCC CTCGAGTCCA TGGGCTATTA CCATGGCGAA
GTGGAAGAAC AGTTAGTCGA AAAAGAAAAA GGCCCGTGGG AATTAAAGCT CACGGTCAAA
GCGGGCGAAC CGGTTAAGAT CCAATGGGTC GATATTAATT TTTCCGGCGA GATGCTTGAC
GATCGCGCCT TCGATAAGTG GCTTGCACAG GTGAATATCA AGCCTGGGGA TGCGCTTAAC
CATGGGGTGT ATTCCGATGT GAAATCCCAA CTGGTGACGC TTGCCTTGGC GAGGGGGTAT
TTCGATGGTG AATTCACCGA GTCGCAAATC AAAATCAACC GCGATTTAAA CACGGCGCAA
ATTAGCCTGC ATTTTAATTC AGGTGCCCGT TACCACTTTG GCCAAGTCAA TTTTGAAGGC
CATACCTTAG AGCCAGATAT TCTCACTAAG CTTATTCCTT TCAAGGAAGA TGCGGCCTAC
TCGACCCGTC GAGTCAGTGC CCTTAACCGC CAGTTATTGG ATACCGGTTA TTTCGCCAAT
ATCAAGGTCA TACCGCAGAT CGATCAGGCA AAGGATAATC AACTCCCCGT CAAAGTGGAG
CTAACCAATA AGGCCAGCCA CTCGATTGAG TTAGGCCTCG GTGGCGACAT AGGTCAAAGC
GCCGATAAAA CCTTCGATCC TCGGGTGCGC GTCACTTGGC GTACACCACA GATTAATAAA
TACGGCCACT CCCAAGAGAC CAGTTTGGAA TGGTCGCCTG ACAGACCAAA GTTTTTAACG
ACTTATACGA TCCCGCTGAC TCATCCCTTA GACGATCAAC TAAAAGTTCG TTTAGGCTTG
CTGCGGGATA AATATGGGGT CACTCAAATT TACGAGCCCG AGAACCGTGA TTTTCGTAAT
ACGGGCCAAC TGGAATCGAC CAAGTATTTA CTCGGGCTAC TCAGGCAACA ACGTTTAGAT
AATCAATGGT TAATGAGTTA TTCTCTCGAT GCAATTCGCG AGGAATATAC CCAGTCTGAC
ATTGATTACA GCCCCACTTT CTATCTGGCG GGGATTAACT TCTCTAAAAC TACCCGCGGA
GATAACTCCC TCGATCCTAA GTCCGGTTTT AGGCAAATAT ACAGTCTAGA TTATGCCGAT
CCCTATCTTG GCTCAGAGAC GCGTCTTGCC CGCTTACAGG CCAAGTTTAA GTGGATTGAC
ACCTTTTTTG ATAACCACAG AATCGTGGCG CGTATGGATT TAGCGGCCAA CCTTGCCAAT
GAAAATGAGC TGGCTTTTAT TCCGCCGTCG CTGCGCTATT TTGCCGGTGG CGATCAAACC
ATCCGTGGCT ATGGCTATCA AGAACTAGGC CCTTATCTCG ATTACATCGA TGCCGATGGC
AAAGTCAATC GCGAGGTTAT CGGTGGCCGT TATTTGATGG TCGGTAGTTT GGAATATCAA
TATTACGTTA CCCCCACTTG GCGTGTTGCC ACCTTTGTGG ATGCGGGTAA CGCCTTTGAT
AACAATCAGT TTGAGCCTGT AGTCTCAGTG GGTGGTGGTA TCCATTGGAT CTCGCCGATT
GGCCCAATTA AGTTAGATTT AGGGGTAGGT TTGAAAGAGA CAGACACCAT CGACCGCTCA
TGGCGCATTC ACTTAACCAT GGGGACAGAG CTATGA
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| Protein sequence | MAADNLLTLS VNGVDEALKR NILAHLGAMP DSEVQRRAFL FNVEDNVSTA LESMGYYHGE
VEEQLVEKEK GPWELKLTVK AGEPVKIQWV DINFSGEMLD DRAFDKWLAQ VNIKPGDALN
HGVYSDVKSQ LVTLALARGY FDGEFTESQI KINRDLNTAQ ISLHFNSGAR YHFGQVNFEG
HTLEPDILTK LIPFKEDAAY STRRVSALNR QLLDTGYFAN IKVIPQIDQA KDNQLPVKVE
LTNKASHSIE LGLGGDIGQS ADKTFDPRVR VTWRTPQINK YGHSQETSLE WSPDRPKFLT
TYTIPLTHPL DDQLKVRLGL LRDKYGVTQI YEPENRDFRN TGQLESTKYL LGLLRQQRLD
NQWLMSYSLD AIREEYTQSD IDYSPTFYLA GINFSKTTRG DNSLDPKSGF RQIYSLDYAD
PYLGSETRLA RLQAKFKWID TFFDNHRIVA RMDLAANLAN ENELAFIPPS LRYFAGGDQT
IRGYGYQELG PYLDYIDADG KVNREVIGGR YLMVGSLEYQ YYVTPTWRVA TFVDAGNAFD
NNQFEPVVSV GGGIHWISPI GPIKLDLGVG LKETDTIDRS WRIHLTMGTE L
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