Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1834 |
Symbol | |
ID | 4252408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2177005 |
End bp | 2177292 |
Gene Length | 288 bp |
Protein Length | 95 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638118445 |
Product | 50S ribosomal protein L25 |
Protein accession | YP_733965 |
Protein GI | 113970172 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.692442 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTACA CTATCCAAGC ACAAACCCGC ACTGAAATAG GGAAAGGTTC GAGCCGCCGC CTACGTCATG CAGGTAAAGT TCCTGCTGTT ATTTATGGCG CAGGCAAAGA GCCAGTTTCT ATTGTTTTTG ATCACAAAGA CATCATCAAC ATTCAAACTA ACGAAGACTT CTACACTTCT GTTGTCACTA TCGTTTTAGA TGGCAAAGAA GTAGGTGTTC GTGCACAAGC TATGCAACGT CACGCGTTCA AGCCAATGAT CGAGCACGTT GACTTCGTTT ACGCTTAA
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Protein sequence | MSYTIQAQTR TEIGKGSSRR LRHAGKVPAV IYGAGKEPVS IVFDHKDIIN IQTNEDFYTS VVTIVLDGKE VGVRAQAMQR HAFKPMIEHV DFVYA
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