Gene Shewmr4_1832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1832 
Symbol 
ID4252406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2175759 
End bp2176307 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content49% 
IMG OID638118443 
Producthypothetical protein 
Protein accessionYP_733963 
Protein GI113970170 
COG category[S] Function unknown 
COG ID[COG3108] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.68574 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGTTAC TTTGTCCTGC CCGTAGGCAG TTGTTGTTAG GCCTCAGTGG TGTGGCATTG 
TGTTCTTTAA TTCCTTCTAA AGCGTTTGCG AGTCGGTCGA CTAAAGGGGT TCGCGATCTC
AGCCTCTATA ATCGCCACAC GGGCGAGCAT AACAATGGCA GTTATTGGAT TGACGGCCAT
TACCAGAGCG AAGTGTTGAA TGATTTTAGT CATTTACTGC GGGATCATCG CCAGAATGTG
GCGGCGCCCA TGGATAAACG CTTATTCGAT CTGCTTTACA CCCTCAAGAG CACCCTCAAT
ACGGAGAATG AGATCCATGT GATTTCAGGC TATCGTTCGC CTAAGACCAA CGCCATGTTG
GCGGGTAAGA GCAGTGGGGT GGCAAAGAAA AGTTATCACA TGCAAGGCAT GGCAATGGAT
ATCGCTATCC CAGGAGTGAA TCTTAAGACT CTTAGAGATG CGGCGTTATC ACTCAAATTG
GGTGGTGTGG GTTATTACCC TAAGTCGGGC TTTGTACATG TTGACTGTGG TCCAGTACGC
CACTGGTAG
 
Protein sequence
MTLLCPARRQ LLLGLSGVAL CSLIPSKAFA SRSTKGVRDL SLYNRHTGEH NNGSYWIDGH 
YQSEVLNDFS HLLRDHRQNV AAPMDKRLFD LLYTLKSTLN TENEIHVISG YRSPKTNAML
AGKSSGVAKK SYHMQGMAMD IAIPGVNLKT LRDAALSLKL GGVGYYPKSG FVHVDCGPVR
HW