| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1816 |
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| Symbol | |
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| ID | 4252390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2154297 |
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| End bp | 2155058 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638118427 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_733947 |
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| Protein GI | 113970154 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTAAAG ACTGCGGCTG CTCCTTACCC CGCCATTCCC ATGATCACGG CCATCTGCAT
CACCATCAGG AATTGCACAC CAATCCTCAG CTTAACGATA AAAAAACCTT GTCGGTGATC
CATAAAATTC TCGATAAAAA CGATGTTGAA GCCGCCCATA ACCGCGCGCA TTTTGAGGCG
CACAATATCA CCGCCTTCAA TCTAATGAGT AGCCCAGGCA GTGGCAAAAC CACCTTGCTC
GAACACTTAA AAGAGTACAC CGCCCTCAAC TACGCCGTCA TTGAAGGGGA TTTAGAGACC
TCCCGCGATG CCGACCGCTT AATTGCCAAA GGCATTCAGG CCCATCAAAT TCAAACTGGC
AGTGCCTGCC ACCTCGACGC CTTTATGGTG CACGGCGCTT TACATCATTT GCCACTCGAA
GGCTTAGATA TTTGTTTTGT CGAAAACGTG GGAAACCTCG TCTGCCCCGC TAGCTACGAT
GTCGGCACCC ATAAAAATAT CGTGCTGCTT TCGGTTCCCG AAGGCGATGA TAAGATTGAG
AAATATCCCG TCATGTTCCG CCGCGCCGAT CTGGTGCTCA TCACCAAGTG TGATCTCTTG
CCCTACTTCG ATTTCAGTGT TGACGAGGCC AAAGCCCAAC TTAAGAAGCT CAACCCCGAC
ACACAGATTT TGGAAGTCTC GATTAAGGAT GGCGATTCCA TGCGAGCCGT CATTGCATGG
CTGAACAACA ACCTTCACCA CGCTTCGGGA GAGCCACAAT AA
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| Protein sequence | MCKDCGCSLP RHSHDHGHLH HHQELHTNPQ LNDKKTLSVI HKILDKNDVE AAHNRAHFEA
HNITAFNLMS SPGSGKTTLL EHLKEYTALN YAVIEGDLET SRDADRLIAK GIQAHQIQTG
SACHLDAFMV HGALHHLPLE GLDICFVENV GNLVCPASYD VGTHKNIVLL SVPEGDDKIE
KYPVMFRRAD LVLITKCDLL PYFDFSVDEA KAQLKKLNPD TQILEVSIKD GDSMRAVIAW
LNNNLHHASG EPQ
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