Gene Shewmr4_1815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1815 
Symbol 
ID4252389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2154052 
End bp2154297 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content43% 
IMG OID638118426 
Producthydrogenase assembly chaperone hypC/hupF 
Protein accessionYP_733946 
Protein GI113970153 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCTGT CTATTCCCTC CCAAGTGGTG GCCATCGATA ACGAGCGTCA ATCGGTCACC 
GTCGATACGC TAGGTGTCAG GCGCGATGTG AGCAGTCATT TAATGACTGA GCCTTTAGCC
ATTGGTGACT ATGTGCTTAT TCATATTGGT TTTGTGATGA ATAAAATTGA TCGCAATGAT
GCACTACAAA GCCTTGAATT ATATAAAGAG ATAGTTTCAA AACTTGAAGC TGAGACCACG
CATTAA
 
Protein sequence
MCLSIPSQVV AIDNERQSVT VDTLGVRRDV SSHLMTEPLA IGDYVLIHIG FVMNKIDRND 
ALQSLELYKE IVSKLEAETT H