| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1813 |
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| Symbol | |
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| ID | 4252387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2151841 |
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| End bp | 2152860 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638118424 |
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| Product | hydrogenase expression/formation protein HypE |
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| Protein accession | YP_733944 |
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| Protein GI | 113970151 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0309] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATT TCCAAACCAA AGATAAAGCG ATTCAACTCA GCCACGGTGG TGGCGGCAAA
GAGATGAATA AACTCATTCG TGAACTGTTT TTTGCCGAGT TCGATAACCC GATCCTGCGT
AGCGAAGAAG ACGCGGCCAA GCTTGAATTG CAGGGCGCGA CCGCCTTTAC CACAGATTCC
TTTACCGTAT CACCACTGTT TTTTGCTGGC GGAGACATAG GCAAATTGGC GATCGCCGGC
ACTGTGAATG ATCTCGCCAT GATGGGCGCC GAGCCACAGT ATTTAAGTTG CAGCGTGATC
ATCGAAGAAG GCTTTTCGCT CAATCAGTTA ACCACTATTG TGCGCAGCAT GGCGAAGGAG
CTTAAACAGA GCGGCGCCAG AATCGTCTGT GGCGATACCA AAGTCGTGCC TAAGGGCTGC
GCCGATGGCT TGTTTATCAA TACCTCAGGC GTTGGGCGCA TTTTACGTCC GAATATCTCG
GCGGCGAATG TCGCACCGGG GGATGCAATC ATTGTCTCCC GCGATGTGGG CTGCCATGGC
GCCGCGATTC TGATGGCGCG CGAAGGTCTG ACCCTCGAAT CAGCTTTGCA AAGCGATTGT
GCCACTCTTT GGCCCGTGGT TGAGCAGCTT ATTGCGGCGA ATATTCCTAT TCATGCGATG
CGTGATGCGA CCCGTGGCGG GCTTTCAGCC GTGTTAAACG AATGGGCGGC GGCCGCCAAT
GTCGGGATAA CGGTCAATGA AGCCAGTATT CCGGTTTGCG ATGAAGTCAA AGGCTTGTGC
GAACTCTATG GCTTTGAGGC CATGGATTTA GCCAATGAAG GCACCTTTAT CTTGGCGGTC
CCTAACGATA TCGCCCTAGG CGCCTTAGAA ATCATGCAGC GCTTTGGTCA TTGCGAGCAG
GCGGCCATCA TCGGCACCGT CAGCGACGAA CTTCCAGGAA AAGTGATCTT AAGAACGCCA
TGGAATACCA AACGTTACTT AGACCTGCCC CAGGGTGAAC TGCTGCCAAG GATTTGTTAA
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| Protein sequence | MADFQTKDKA IQLSHGGGGK EMNKLIRELF FAEFDNPILR SEEDAAKLEL QGATAFTTDS
FTVSPLFFAG GDIGKLAIAG TVNDLAMMGA EPQYLSCSVI IEEGFSLNQL TTIVRSMAKE
LKQSGARIVC GDTKVVPKGC ADGLFINTSG VGRILRPNIS AANVAPGDAI IVSRDVGCHG
AAILMAREGL TLESALQSDC ATLWPVVEQL IAANIPIHAM RDATRGGLSA VLNEWAAAAN
VGITVNEASI PVCDEVKGLC ELYGFEAMDL ANEGTFILAV PNDIALGALE IMQRFGHCEQ
AAIIGTVSDE LPGKVILRTP WNTKRYLDLP QGELLPRIC
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