Gene Shewmr4_1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1808 
SymbolpheS 
ID4252382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2146615 
End bp2147634 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content47% 
IMG OID638118419 
Productphenylalanyl-tRNA synthetase subunit alpha 
Protein accessionYP_733939 
Protein GI113970146 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0016] Phenylalanyl-tRNA synthetase alpha subunit 
TIGRFAM ID[TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.702278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTATCA AGCGCGACTA TGCAGTGGAA GAGAAAATGC AGCAGTTAAC TGAGATCGTA 
GAACAAGCCT TAGTCATTAT TGACCAGGCC AGTGATCTAA AAGCACTGGA TGATATCCGT
GTCGATTACC TGGGTAAGAA GGGTAAGATC ACCGACATGA TGAAAATGAT GGGCAGCTTA
AGTCCTGAAG AAAAACCCGC TTTTGGTCAG GCGGTCAATG ATGCGAAACA GGCCATTCAA
CAGAAATTAA CTGAACGTAT CGACGGCCTG AAAAGTGCCG AGCTGGAGGC CAAATTAATC
GCCGAAAAGA TTGATGTGAC GCTACCAGGC CGCACTATCG ATATCGGTGG TTTACACCCA
GTGACGCGCA CCATTGAACG TATCGAAACC TTTTTTGGGG AATTAGGGTT TTCGGTAAAA
CAAGGGCCAG AAATCGAAGA TGACTTCCAT AACTTTGACG CCTTGAATAT CTCTGAGCAC
CACCCAGCGC GTGCCGACCA CGATACGTTC TATTTTAATC CTAAGCTGAT GCTGCGTACC
CAAACCTCGG GCGTGCAGAT CCGTACCATG GAAACTGAAA AGCCGCCATT GCGGATTATT
TCACCGGGTC GTGTGTATCG TAACGACTAC GACCAAACTC ACACGCCAAT GTTCCACCAA
GTGGAAGGTT TGCTGGTGGA TGAAAACGTT AACTTCGCCG AATTAAAAGG TGTGTTACAC
GACTTCCTGC GTAACTTCTT CGAGGAAGAT TTGCAGGTGC GTTTCCGTCC TTCTTATTTC
CCATTTACTG AACCTTCAGC CGAAGTAGAC GTGATGGGTA AAAACGGCAA ATGGTTAGAA
GTGTTAGGCT GCGGTATGGT GCACCCAAAT GTGCTACGTA GCGTGGGCAT CGATCCAGAA
AAATACTCTG GTTTTGCTTT TGGTATGGGC GTTGAGCGTT TAACTATGCT GCGTTACGGC
GTAAACGATC TACGTGCGTT TTTCGAAAAC GACCTGCGTT TCCTGAAGCA ATTTAAATAA
 
Protein sequence
MFIKRDYAVE EKMQQLTEIV EQALVIIDQA SDLKALDDIR VDYLGKKGKI TDMMKMMGSL 
SPEEKPAFGQ AVNDAKQAIQ QKLTERIDGL KSAELEAKLI AEKIDVTLPG RTIDIGGLHP
VTRTIERIET FFGELGFSVK QGPEIEDDFH NFDALNISEH HPARADHDTF YFNPKLMLRT
QTSGVQIRTM ETEKPPLRII SPGRVYRNDY DQTHTPMFHQ VEGLLVDENV NFAELKGVLH
DFLRNFFEED LQVRFRPSYF PFTEPSAEVD VMGKNGKWLE VLGCGMVHPN VLRSVGIDPE
KYSGFAFGMG VERLTMLRYG VNDLRAFFEN DLRFLKQFK