| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1795 |
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| Symbol | |
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| ID | 4252369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2130879 |
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| End bp | 2131616 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638118406 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_733926 |
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| Protein GI | 113970133 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATTC CAGCAATTGA TTTAATTGAT GGCAAGGTAG TTAGGCTCTA CCAAGGGGAT
TATGGGCAGC AGACCACCTT CGATTTAAGC CCCCTGGCCC AGTTGCAATC CTACCAAGAC
CAAGGGGCAA ACTGGCTGCA TATCGTGGAT TTAACTGGCG CCAAAGAACC CGCTAAACGC
CAAACGACTT TGATTGCCAA GCTGACTGCG GGGCTAAGCG CCAATATTCA AGTGGGCGGC
GGGATCCGCA CTGAAGAACA AGTTGCCGAG TTATTATCCC TTGGGGTTAA ACGCGTGGTG
ATAGGCTCGC TCGCCGTCAA AGAGCCCGAG TTAGTCAAAG GCTGGTTTAA CAAGTTTGGC
AGCGAGGCTA TTTGCCTCGC ACTGGATGTC AATATCAATC AGAGCGGCGA GAAAATCGTT
GCGGTTTCTG GCTGGCAAAG CGGTGGCGGT AAGAGTCTAG AATCTATCGT CGAAGACTTT
AGCCAAGTTG GGCTTAAACA TGCGCTGGTG ACTGACATCA GCCGTGATGG CACCCTCACA
GGCGCCAATA CCGAACTCTA TCGTGAGCTA TCCAGCCGCT ATCCCGATAT TGCTTGGCAA
GCCTCGGGCG GTATTGCCAC CCTTGAGGAT GTTGCCGCCG TCAGAGACAG TGGCGCCGCG
GGCATCATTA TCGGTAAAGC TTTACTTATC AATCAGTTTA ATGTGGCGGA GGCAATCCAA
TGCTGGCCAA ACGAATAG
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| Protein sequence | MIIPAIDLID GKVVRLYQGD YGQQTTFDLS PLAQLQSYQD QGANWLHIVD LTGAKEPAKR
QTTLIAKLTA GLSANIQVGG GIRTEEQVAE LLSLGVKRVV IGSLAVKEPE LVKGWFNKFG
SEAICLALDV NINQSGEKIV AVSGWQSGGG KSLESIVEDF SQVGLKHALV TDISRDGTLT
GANTELYREL SSRYPDIAWQ ASGGIATLED VAAVRDSGAA GIIIGKALLI NQFNVAEAIQ
CWPNE
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