Gene Shewmr4_1789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1789 
Symbol 
ID4252363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2123446 
End bp2123796 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content48% 
IMG OID638118400 
Producthypothetical protein 
Protein accessionYP_733920 
Protein GI113970127 
COG category[S] Function unknown 
COG ID[COG3784] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAA TGCCACTCAA AACCCTGCTA CGAAAGCCAA CATTACTGCT GTTGCTCGGC 
CTGAGTTTAT TCAGCTTAAA TGCCTTTGCC ATGTCACTAC AGGAAGCCAA ATCCCAAGGT
TACTTAGGTG AGCAGCTCAA TGGCTATCTG GGCCTAGTGC AAAATAATAG CGAGGCCAAA
GCCGTGATGG ACGATGTGAA CAACAAACGC CGCGCCCATT ACGAGACCAT CGCGAAAAAG
AACAATATCT CCGCCGCCGA TGTGGCCAAA CTTGCCGGTG AAAAAGCCAT CGCCGCCACA
GATAAAGGCA ACTATGTGCA AAACGCCCAA GGAAAATGGG TTAAAAAGTA G
 
Protein sequence
MKSMPLKTLL RKPTLLLLLG LSLFSLNAFA MSLQEAKSQG YLGEQLNGYL GLVQNNSEAK 
AVMDDVNNKR RAHYETIAKK NNISAADVAK LAGEKAIAAT DKGNYVQNAQ GKWVKK