| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1785 |
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| Symbol | |
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| ID | 4252359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2119131 |
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| End bp | 2120012 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638118396 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_733916 |
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| Protein GI | 113970123 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCTTT GGGATGGCAT ATCAGAATTT GTAGCAGTGG CCGAGGCCGA GAACTTTACC
TTGGCCGCAC AGCGCCTCAA TGTGTCCACC GCCCACGTGA GTCGGCAAAT CGGTGCGCTG
GAAAATCGCC TCGGCACTAA GCTGTTTTAC CGTACGACTC GCAAGGTATC GCTTACCGAA
GAAGGCACGA TTTATTATCG TCATTGCCGC CAATTGCAAA CAGGCCTCGA GGAGGCCGAG
CGGGCAATTA CCGATCTAAA AGGTTCGCCC CAAGGATTGG TAAAACTCAC CGCGCCCGTG
GCCTATGGCG AAAAATTTAT CATGCCGTTA CTCAATGATT TTATGGTGCA ATATCCCAGC
GTCGAATTTA ATGTCGACTT GACCAACAGA ACCTTAGATT TGATTGAAGG CGGTTACGAT
TTAGCCATTC GCCTTGGCAA ACTCGCCGAC TCCAGCCTGA TGGCCAAACC CTTGAGTAGC
CGCACCCATT ATGTGGCCGC CTCGCCCAGT TACGTTGAAA AATACGGTGA GCCCCACACG
CTTTCGGAGT TAAATCAACA TAATTGCCTG ATCGGGAATC ACAATTACTG GCGCTTTATT
GAAAATGGCC GTGAGCGCAA TATTAAGGTA CGTGGCAACC TTATCTGCAA CAGCGGTTAC
GCCCTGCGGG ATGCGGCATT AAAGGGCATA GGAATAGTGC AACTCCCTGA TTATTATATT
GAGGAAGATA TTCATGCAGG CCGACTCATC TCCTTTCTCG ACGCGCACCG TGAAGCCAAA
GAAGGCATTT GGGCGCTCTA TCCGCAGAAT CGTCACCTGA GCGCCAAAGT AAGGGTATTA
GTGGATTATC TCGCGGAAAA ACTGGCGATG GAGAATACGT AG
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| Protein sequence | MYLWDGISEF VAVAEAENFT LAAQRLNVST AHVSRQIGAL ENRLGTKLFY RTTRKVSLTE
EGTIYYRHCR QLQTGLEEAE RAITDLKGSP QGLVKLTAPV AYGEKFIMPL LNDFMVQYPS
VEFNVDLTNR TLDLIEGGYD LAIRLGKLAD SSLMAKPLSS RTHYVAASPS YVEKYGEPHT
LSELNQHNCL IGNHNYWRFI ENGRERNIKV RGNLICNSGY ALRDAALKGI GIVQLPDYYI
EEDIHAGRLI SFLDAHREAK EGIWALYPQN RHLSAKVRVL VDYLAEKLAM ENT
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