| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1779 |
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| Symbol | |
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| ID | 4252353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2113374 |
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| End bp | 2114390 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638118390 |
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| Product | transposase IS116/IS110/IS902 family protein |
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| Protein accession | YP_733910 |
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| Protein GI | 113970117 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTA CTACAATCGG TTTAGATATC GCAAAGTCTG TTTTTCATGC TGTTGGTGTC
GATAAAGCAG GCAAGGTACT CAAAAAGAAA ATGCTTAGAC GCAAAGACTT GCTTCCCTTT
CTCGCTCAAA TTGAGCCTTG TCTAATTGTG ATGGAAGCCT GCAGTGGAGC AAATTACTGG
GCCAGAGAAT TTGAGCTGTT GGGCCATAAC GTCAAGCTAA TCGCACCTCA ATTTGTGGTG
CCTTTTCGGC AAGGTAACAA AAATGACTAC AACGATGCCT TAGCCATCGC TGAAGCTGCG
CAGCGACCCA ACATGCGGTT TGTAAAACCC AAAAGCGTCG AGCAACAAGA TGTACAACTG
CTTCACCGTA TGCGTGAGCG TTTAAACAAA CAATCAACCG CCTTAATCAA TCAAGTCAGA
GGGATGTTAG CGGAATACGG CATTGTAATA ACCAAAAGTA AATCTGCTTT TAAAGTACAG
TTCCCTGAGA TTTTGGCTAA CGAAACTAAT GCGCTGACTA CCAAAGGTCG GGCCATTTTT
TATCAGTTAT ATGAAGAGTT TAGTGATATA GAAAAACGGC TTAAGAGTTG TGATGCCCAA
GTGCTCACTG AAATTAAGAA CAATGTGATT TGCCAGCGTT TAGAAACTAT CCCAGGTATT
GGTCCAGTCA CCGCTACGGC CTTTTATGCG GCCGCCGGTG ATGGTAAAGA TTTCACTAAT
GGCAGGCACT TTTCTGCTTG GTGTGGCTTG GTTCCCAAGC AACACAGCAG CGGAGGTAAA
GATAACCTCC TTGGGATAAG CAAGCGGGGG AATGCGTATT TACGCACTTT GTTCATCCAC
GGCGCCAGAG CGGTGTTGCA ACACAGCCAG AATAAGCAAG ATAAGTTTAG TTGCTGGGCC
ATCCAGTTAG CAGAACGGCG AGGTTTTAAC CGAGCCTGTG TGGCCGTCGC CAATAAACTC
GCCAGAATGG CATGGGTTAT CGCGGCACGT GAAGAAGAAT ATCGACTTCC AGTATAG
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| Protein sequence | MKITTIGLDI AKSVFHAVGV DKAGKVLKKK MLRRKDLLPF LAQIEPCLIV MEACSGANYW
AREFELLGHN VKLIAPQFVV PFRQGNKNDY NDALAIAEAA QRPNMRFVKP KSVEQQDVQL
LHRMRERLNK QSTALINQVR GMLAEYGIVI TKSKSAFKVQ FPEILANETN ALTTKGRAIF
YQLYEEFSDI EKRLKSCDAQ VLTEIKNNVI CQRLETIPGI GPVTATAFYA AAGDGKDFTN
GRHFSAWCGL VPKQHSSGGK DNLLGISKRG NAYLRTLFIH GARAVLQHSQ NKQDKFSCWA
IQLAERRGFN RACVAVANKL ARMAWVIAAR EEEYRLPV
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