| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1769 |
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| Symbol | |
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| ID | 4252343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2096145 |
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| End bp | 2097185 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638118380 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_733900 |
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| Protein GI | 113970107 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCGA AAGCGACCTC AATCGATATT GCTTATCGTG CTGGTGTATC CCAGTCTACG
GTTTCCCGAG CCTTGAGAAA TAGTCCGTTA GTCAATTTAG AAACCCGTCA GCGGATCCAA
GCGATTGCCA AGGAACTCAA TTACAAAGTC GATAAAAACG CCAGTAACCT GCGCACCCAA
AACAGCCATA CCTTAGCCCT GTTGTTGTGT GAAGACCCCA CCAATGATGA CTCACTGATC
AACCCGTTTT TTCTGTCGAT GCTAGGCTCG ATTACACGGG CGACGGCGCA ACAAGGTTAT
GATTTACTGG TGTCATTTCA ACAGCTTTCC AGCGATTGGC ATGCCGATTA CGAAGACAGC
AATAAAGCCG ATGGCATTAT CTTACTGGGT TACGGCGACT ATATGGATTA CGAGCAAAAG
CTCGAAAAAT TGCTGGCACA GAACACCCAC TTTGTGATTT GGGGCGCGGA GCATAACAAT
AAATCCGTGC TATCCATCGG CTGCGATAAT CATCAAGGTG GTTTGATTGC CACTGAACAT
CTTATTTCCC TTGGTCGTAA AGCCTTTGCC TTTTTAGGGG ATGCGTCGAG CCATAGTCCC
GAGTTTAGGG ACAGATATCT AGGCCATGTC AAAGCGCTGG AAACCGCAGG ATTACCCGTG
GTGGCCGCAA GACAAATCTC GGCCATTAGC ACCGAAAGTG CCGGTTATGA TGCGGCGATG
GCGCTGCTTG AGAGCGGACT GAGTGTTGAT GCGATTTTTG CCGCCAGTGA TTTAATCGCC
ATCGGTGCGA TTCGCGCCTT AAAAGAGAAG GGGATCTTGG TACCCGAGCA AGTCGCTGTG
GTGGGATACG ATGATATTCC GGTGGCGAGT TTTGCCAATC CACCGCTGAC CACGATTAAG
CAAAATACCC AATTAGCGGG GGAAATCTTA GTGGAAAGCC TACTAAAGCT TATTCGTGGT
CAAGCGGTGA CCCCGCAATT AATCCCAACG ACCTTAGTGG TACGCAGCTC CTGCGGGATT
GATCATACGC CGCTCGCTTG A
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| Protein sequence | MASKATSIDI AYRAGVSQST VSRALRNSPL VNLETRQRIQ AIAKELNYKV DKNASNLRTQ
NSHTLALLLC EDPTNDDSLI NPFFLSMLGS ITRATAQQGY DLLVSFQQLS SDWHADYEDS
NKADGIILLG YGDYMDYEQK LEKLLAQNTH FVIWGAEHNN KSVLSIGCDN HQGGLIATEH
LISLGRKAFA FLGDASSHSP EFRDRYLGHV KALETAGLPV VAARQISAIS TESAGYDAAM
ALLESGLSVD AIFAASDLIA IGAIRALKEK GILVPEQVAV VGYDDIPVAS FANPPLTTIK
QNTQLAGEIL VESLLKLIRG QAVTPQLIPT TLVVRSSCGI DHTPLA
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