Gene Shewmr4_1763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1763 
Symbol 
ID4252337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2090044 
End bp2090553 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content48% 
IMG OID638118374 
ProductPTS system glucose-specific transporter subunit 
Protein accessionYP_733894 
Protein GI113970101 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2190] Phosphotransferase system IIA components 
TIGRFAM ID[TIGR00830] PTS system, glucose subfamily, IIA component 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0658296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTTT TAAGCCGAAT AAGGCGATTG GTATCGGGAC AACCACAACT GGCTGGCGGC 
ATTATGGTTT ACGCCCCAGT GAACGGGGAA ATTGTGGCCA TTGAAAAGGT CCCCGATGTG
GTGTTTGCAG AGAAAATTGT CGGTGATGGT ATCGCCATTG CACCAAAGGG AGACACGATT
GTCGCCCCAA TCGACGGCAC CATAGGTAAG ATTTTTGAGA CGAATCATGC TTTTAGTATC
GAATCGCCAC AGGGATTAGA GCTTTTCGTG CACTTTGGCG TAGGAACCGT TGAGCTAAGG
GGCCGAGGTT TTAGCCGTTT GGCGGAGGAA GGCCAAGAGG TCAAAGTGGG CGATCCTATT
CTGTCTTTCG ATATTGATTA CTTAAAAGAT CAAGTCGATA GCCTACTCAC TCCCGTTGTG
CTGGCCAATA TGGAAGATGT GAAATACTTA GATAAGGCTC AAGGTAGCGT CACCGCAGGT
AAAGACGCGA TTTTTACCGT CCAGCTTTAA
 
Protein sequence
MGFLSRIRRL VSGQPQLAGG IMVYAPVNGE IVAIEKVPDV VFAEKIVGDG IAIAPKGDTI 
VAPIDGTIGK IFETNHAFSI ESPQGLELFV HFGVGTVELR GRGFSRLAEE GQEVKVGDPI
LSFDIDYLKD QVDSLLTPVV LANMEDVKYL DKAQGSVTAG KDAIFTVQL