Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1763 |
Symbol | |
ID | 4252337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2090044 |
End bp | 2090553 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638118374 |
Product | PTS system glucose-specific transporter subunit |
Protein accession | YP_733894 |
Protein GI | 113970101 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2190] Phosphotransferase system IIA components |
TIGRFAM ID | [TIGR00830] PTS system, glucose subfamily, IIA component |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0658296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGATTTT TAAGCCGAAT AAGGCGATTG GTATCGGGAC AACCACAACT GGCTGGCGGC ATTATGGTTT ACGCCCCAGT GAACGGGGAA ATTGTGGCCA TTGAAAAGGT CCCCGATGTG GTGTTTGCAG AGAAAATTGT CGGTGATGGT ATCGCCATTG CACCAAAGGG AGACACGATT GTCGCCCCAA TCGACGGCAC CATAGGTAAG ATTTTTGAGA CGAATCATGC TTTTAGTATC GAATCGCCAC AGGGATTAGA GCTTTTCGTG CACTTTGGCG TAGGAACCGT TGAGCTAAGG GGCCGAGGTT TTAGCCGTTT GGCGGAGGAA GGCCAAGAGG TCAAAGTGGG CGATCCTATT CTGTCTTTCG ATATTGATTA CTTAAAAGAT CAAGTCGATA GCCTACTCAC TCCCGTTGTG CTGGCCAATA TGGAAGATGT GAAATACTTA GATAAGGCTC AAGGTAGCGT CACCGCAGGT AAAGACGCGA TTTTTACCGT CCAGCTTTAA
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Protein sequence | MGFLSRIRRL VSGQPQLAGG IMVYAPVNGE IVAIEKVPDV VFAEKIVGDG IAIAPKGDTI VAPIDGTIGK IFETNHAFSI ESPQGLELFV HFGVGTVELR GRGFSRLAEE GQEVKVGDPI LSFDIDYLKD QVDSLLTPVV LANMEDVKYL DKAQGSVTAG KDAIFTVQL
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