Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1759 |
Symbol | |
ID | 4252333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2086852 |
End bp | 2087523 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638118370 |
Product | glutathione S-transferase domain-containing protein |
Protein accession | YP_733890 |
Protein GI | 113970097 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.296868 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTTCC CCATACTCTA CAGTTTTCGC CGTTGTCCCT ATGCCATGCG CGCTCGCCTT GGCCTGTTAC TCGGCCAATG CCAAGTGGAA GTGCGGGAAA TTACCCTTAA AGCCAAACCC ATTGGGATGT TAGCGATTTC TCCTAAAGGT ACTGTACCTG TATTGCAGCT CCCTAATGGA GTTGTGATTG CCGAGAGCTT GGATATTATG CGCTGGGCAC TGACCAAGAC AAATTCGCCA GCGGCGCGGC AGTTACTCGG GGAGACAGCC TCAGAGCAAG CGCTGATCGC AGAACTGATT GCGCAGAATG ATCTTGAATT CAAACCTTGG CTGGATAAGT ACAAATATGC CGACCGCCAC CCTGAGTATT CGCAAGCGGA TTATTTCACC AAGGCCAGCG CATTTTTAGA GAGGCTCGAA ACGAACCTTA GCCAGCATCC CTATCTTATC GGCCAAGCGT TAAGCCTTGC GGATTTTGCC ATTATGCCTT TTATTCGCCA ATTTACGGCG GTGGATGCCA AACGGGATCT GAGTGTGGCG TTTCCACGCT TGATGAACTG GTTAACGACG CTGACAAGCA GCGAAATATT TTTGCAAGCA ATGGAAAAAC ATGTGATCTG GCAAGCTGGG AACTCGCCAA TTTACTTGTT AGGAACGTCT ATAAGTAAAT AA
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Protein sequence | MPFPILYSFR RCPYAMRARL GLLLGQCQVE VREITLKAKP IGMLAISPKG TVPVLQLPNG VVIAESLDIM RWALTKTNSP AARQLLGETA SEQALIAELI AQNDLEFKPW LDKYKYADRH PEYSQADYFT KASAFLERLE TNLSQHPYLI GQALSLADFA IMPFIRQFTA VDAKRDLSVA FPRLMNWLTT LTSSEIFLQA MEKHVIWQAG NSPIYLLGTS ISK
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