| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1754 |
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| Symbol | |
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| ID | 4252328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2082510 |
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| End bp | 2083136 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118365 |
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| Product | lysine exporter protein LysE/YggA |
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| Protein accession | YP_733885 |
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| Protein GI | 113970092 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.171437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTC AACTTGTCAA TGATCCACAA CTTTGGACAT TAATGGCCTC AGCGGCTCTC
TTTTGTGCAA CCATGACCAT GACTCCCGGC CCGAATAATG TTTTACTCGC CAGCTCAGGT
GCCCATTTCG GGGTGATGCG CACCATTCCA CATATCGCGG GGATCCGCTT AGGCTCGACT
TCTTTGCATC TGTCGGTATT ACTCGGTCTT GGTGCTTTGT TTGAGACGTT TCCGATGTTG
CACCAAGCGT TGAAATACGC GGCATTGCTG TATTTACTGC ATCTTGCCTA TCGATTAGTG
ACCTCTCCCG TAAAGGCTGC GCATTTGGAT GAAGGGCGTC AACCGATGAG CTTGATGGAG
GCGGCGCTGT TTCAGTGGAT TAATCCCAAA TCCTGGATGT CGACCATTAC CCTTTGCAGC
GCGTTTACCT TAGGCGGCGA TGGCTTTTGG CTCAGTGCGG TATTGGGCGT GCTGGTGTTT
AATCTGGTGG GGTTTCCGGC GTCTTTTACA TGGGTGTTTG TGGGCGCAGC TATCAGTAAA
AAGCTCAATA CGGATAAACG TCGACGCCAT TTTAACTGGT TTATGGGCAG TTTATTGTTG
GTGTCCTTAC CTATGATCCT GCGATAA
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| Protein sequence | MDIQLVNDPQ LWTLMASAAL FCATMTMTPG PNNVLLASSG AHFGVMRTIP HIAGIRLGST
SLHLSVLLGL GALFETFPML HQALKYAALL YLLHLAYRLV TSPVKAAHLD EGRQPMSLME
AALFQWINPK SWMSTITLCS AFTLGGDGFW LSAVLGVLVF NLVGFPASFT WVFVGAAISK
KLNTDKRRRH FNWFMGSLLL VSLPMILR
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