| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1753 |
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| Symbol | |
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| ID | 4252327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2081060 |
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| End bp | 2082418 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638118364 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_733884 |
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| Protein GI | 113970091 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.719821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTACAA TTTGGACGCC AGATCTAGAG GCATTTACAG GTCCTAAATA TCAACGTCTG
GTCAGTGCGA TCGAGCAAGG CATTTTGCTA AAAGCCCTTC CCCATGGCAC GAAACTCCCG
CCACAGCGGC GTTTAGCCGA TGCACTTGGG GTGACCATAG GTACTGTCAC TCGGGCCTAT
GCTCTAGCGG AGCAACGCGG TTATGTGGAA GCGCGTATCG GTGATGGTAC TTATGTCAAC
GCCTCTCCCG TGCCAGAGCT TAATCATTTG CAGCTCAATA TGGCGACTTG TCAGCAGCCG
CTGACGGATC AAATCAGTAC GCTGAGTGAT TGCCTAAGCC AACTGGCTAA GGATCCGGCG
AAACTGAGTC AACTCCTTGG CTATCGCGCC AGCCCCTTAG ATCAACATCA ACAGATATTT
CACCACTGGC TTGCGCAACG CGGCATTGAG CAACACCCAG AGCAATTGAT CTTTACCCAT
GGTGGACAAC AGGCGATTTT TGCCTGCCTT AATGCTTTCC TGGCCAAGGG CGAGGTACTC
CTGCACGAGC AGTACAGCTA TCCCGGAGTG CGTATTTGCG CTAAACAATT GGGTATCAAT
AGTATTGGCG TACCGTTAAC CTCTGACGGG GTCGATCTAG CAAGATTCGA GGCTTTAGTT
CAAATCCATC AACCTAAACT GGTGTATTTA ACCCTCAACA ATCAAAACCC CACCTGCATT
CAATACAGTG AGCAACAGAG AGAAAAACTG TTGGCACTCG CGGAGCAGTA CCAGTTTTAT
ATCATTGAAG ATGATGTGAA TTATTGTCTC CCTGAAGAGT GGCACCCTCC GCTGTGGCAG
TTAGCGCAGA CGCTGAATGT GCCGAGGGTC ATTTACATTT CAAGCCTGTC TAAGCTGTTT
TCAGGGGGCT TAAGGCAAGG TTTTATTTTA GTGCCCGAGC CGCTTATCGC GCCATTGCGC
CTCGCCATTC ATAGCCAATG TTGGATGGTT TCGCCGCTCA ATGTGGAGCT CGCCTGTCAG
CTTATCAAGC GCGGGCACAT CACGGCCAAT CGCGATGCGA TTATTCGCGA GCGTCAGCAG
CAATGCATGG CATTGGGTGA CAAGCTGGGG TTAACTCAAC GCTGGCGGGG TTTAAATGGC
TGGATCCAGT TACCCGAAGA CATTAAAGCC CATCATCTGG TGACCGCCTT AGCGGCAAAA
GGCGTGCTGA TCCGTAATGG GGATGACTTT AACTGCCATG ACAACTTTAT CCGATTAAGT
TTAGGTGGCG CCGAAAACGA TACCCAATTC CAGCTTGCGC TCGACTGCAT CGAATCCACC
TTTAACGCCC TCAAGCAACA CGCCTATTCG GTCGTATAG
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| Protein sequence | MGTIWTPDLE AFTGPKYQRL VSAIEQGILL KALPHGTKLP PQRRLADALG VTIGTVTRAY
ALAEQRGYVE ARIGDGTYVN ASPVPELNHL QLNMATCQQP LTDQISTLSD CLSQLAKDPA
KLSQLLGYRA SPLDQHQQIF HHWLAQRGIE QHPEQLIFTH GGQQAIFACL NAFLAKGEVL
LHEQYSYPGV RICAKQLGIN SIGVPLTSDG VDLARFEALV QIHQPKLVYL TLNNQNPTCI
QYSEQQREKL LALAEQYQFY IIEDDVNYCL PEEWHPPLWQ LAQTLNVPRV IYISSLSKLF
SGGLRQGFIL VPEPLIAPLR LAIHSQCWMV SPLNVELACQ LIKRGHITAN RDAIIRERQQ
QCMALGDKLG LTQRWRGLNG WIQLPEDIKA HHLVTALAAK GVLIRNGDDF NCHDNFIRLS
LGGAENDTQF QLALDCIEST FNALKQHAYS VV
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