Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1750 |
Symbol | |
ID | 4252324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2075168 |
End bp | 2076886 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638118361 |
Product | acetolactate synthase 3 catalytic subunit |
Protein accession | YP_733881 |
Protein GI | 113970088 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.524546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAAGT TATCCGGCGC CAGCATGATT GTGCGATCCC TTATCGATGA AGGTGTAAAG CACATATTTG GTTATCCTGG CGGCTCAGTG TTAGATATCT ACGACGCCCT GCACCTTATC CCCGGTATTG AACATATTCT GGTTCGTCAC GAACAAGCTG CCGTGCATAT GGCCGATGGT TATGCCCGCG CCACGGGTAA AGTGGGCGTG GTACTCGTGA CCTCAGGCCC AGGTGCCACC AATGCTATTA CCGGCATCGC CACCGCCTAT ATGGATTCAA TTCCATTAGT GGTGTTATCA GGCCAAGTGC CGAGCAATTT AATCGGTAAC GATGCGTTCC AAGAATGCGA CATGATTGGG ATTTCACGCC CAGTCGTCAA ACACAGCTTT TTAGTACAAG ATCCCACTCA AATTCCTGAG ATCATTAAAA AAGCCTTTTA TATTGCTTCC ACAGGTCGCC CCGGCCCCGT GGTTGTCGAC TTGCCAAAGG ATTGCCTCAA TCCAGCATTA CTGCACGACT ATATTTACCC CGAGAGCATT AAAATGCGCT CCTATAATCC AACGACATCG GGCCATAAGG GTCAAATTCG CCGTGGATTA CAGGCATTAC TCGCCGCGAA AAAACCTGTG CTTTATGTGG GTGGAGGCGC CATTATCTCA AGCAGTGAAA AGCAGATCTT AGCCCTAGCG GAAAAATTAA ATATCCCCGT TGTCAGCACC TTGATGGGCC TTGGCGCCTT CCCTGGCACC CATAAAAACA GCTTAGGAAT GCTGGGGATG CACGGTCGTT ATGAAGCCAA CATGACCATG CATAACTGCG ATCTTATCTT CGGGATTGGC GTGCGTTTTG ATGACAGAAC CACCAACAAC ATCGAAAAAT ACTGCCCTAA TGCCACCATT TTACATATTG ATATCGACCC TTCATCGATT TCAAAAACCG TGCGAGTGGA TATCCCCATC GTTGGCTCCG CCGATATCGT ACTAGACAGC ATGCTAGCTT TGCTGGAGGA ATCAAAGGAG AGCAACGATA GCGAGGCAAT TAATCAATGG TGGCAAGAAA TCACGGTTTG GCGTAACCGC AACTGCTTGG CATACGATAA GGAAAGCCAT CGGATCAAAC CACAGCAAGT GATTGAAACC CTTTACAAAC TCACTAATGG TGAGGCCTAT GTCGCCTCGG ATGTAGGCCA GCATCAAATG TTTGCCGCGC TGTATTATCC CTTTGATAAA CCTCGTCATT GGATTAACTC CGGCGGCCTT GGCACCATGG GCTTTGGTCT ACCCGCTGCC ATGGGAGTCA AAATGGCAAT GCCGGACGAA ACCGTTGTGT GCGTCACGGG CGATGGTTCG ATTCAGATGA ATATTCAAGA GCTTTCAACC GCTCTGCAAT ACGATACGCC GGTTAAAATT ATCAACTTAA ACAACCGTTT CCTTGGCATG GTGAAACAAT GGCAGGATAT GATCTACTCG GGTCGCCATT CCCATTCCTA TATGGATTCG GTCCCCAACT TTGCCAAAAT TGCCGAAGCC TATGGCCATG TTGGTATGAC GATTAGCGAT CCTGCTGAGC TTGAGTCTAA GATGGCCGAA GCCCTTGCCA TGAAAGACAG ACTGGTATTT ATCGACATTA TGGTGGATGA GACTGAGCAC GTGTATCCCA TGCTTATCCG CGGCGGCGCG ATGAATGAAA TGTGGTTAAG CAAAACGGAG AAATGCTAA
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Protein sequence | MEKLSGASMI VRSLIDEGVK HIFGYPGGSV LDIYDALHLI PGIEHILVRH EQAAVHMADG YARATGKVGV VLVTSGPGAT NAITGIATAY MDSIPLVVLS GQVPSNLIGN DAFQECDMIG ISRPVVKHSF LVQDPTQIPE IIKKAFYIAS TGRPGPVVVD LPKDCLNPAL LHDYIYPESI KMRSYNPTTS GHKGQIRRGL QALLAAKKPV LYVGGGAIIS SSEKQILALA EKLNIPVVST LMGLGAFPGT HKNSLGMLGM HGRYEANMTM HNCDLIFGIG VRFDDRTTNN IEKYCPNATI LHIDIDPSSI SKTVRVDIPI VGSADIVLDS MLALLEESKE SNDSEAINQW WQEITVWRNR NCLAYDKESH RIKPQQVIET LYKLTNGEAY VASDVGQHQM FAALYYPFDK PRHWINSGGL GTMGFGLPAA MGVKMAMPDE TVVCVTGDGS IQMNIQELST ALQYDTPVKI INLNNRFLGM VKQWQDMIYS GRHSHSYMDS VPNFAKIAEA YGHVGMTISD PAELESKMAE ALAMKDRLVF IDIMVDETEH VYPMLIRGGA MNEMWLSKTE KC
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