| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1747 |
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| Symbol | ndk |
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| ID | 4252321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2073354 |
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| End bp | 2073785 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638118358 |
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| Product | nucleoside diphosphate kinase |
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| Protein accession | YP_733878 |
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| Protein GI | 113970085 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0105] Nucleoside diphosphate kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000066664 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGATCG AACGCACATT TTCTATCATT AAGCCTGATG CTGTTGCTAA AAACCACATC
GGTGCAATCT ACAACCGTTT TGAAACTGCT GGTCTGAAGA TCGTTGCAGC TAAAATGTTA
CACCTGACTA AAGAACAAGC TGAAGGTTTC TATGCTGAGC ATAGCGAGCG CGGCTTCTTC
GGTGCTCTGG TTGCTTTCAT GACTTCTGGC CCTATCATGG TTCAAGTATT AGAAGGCGAA
AACGCTGTTT TAGCTCACCG CGAAATTTTA GGTGCAACTA ACCCAGCTCA AGCGGCTCCA
GGTACTATCC GTGCTGATTT CGCTCAAAGC ATCGACGAAA ACGCAGCTCA CGGTTCTGAT
TCTTTAGAAT CAGCAGCACG TGAAATTGCT TACTTCTTCA GTGCTGAAGA ACTGTGTCCA
CGTACTCGTT AA
|
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| Protein sequence | MAIERTFSII KPDAVAKNHI GAIYNRFETA GLKIVAAKML HLTKEQAEGF YAEHSERGFF
GALVAFMTSG PIMVQVLEGE NAVLAHREIL GATNPAQAAP GTIRADFAQS IDENAAHGSD
SLESAAREIA YFFSAEELCP RTR
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