| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1743 |
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| Symbol | hscA |
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| ID | 4252317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2069241 |
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| End bp | 2071103 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638118354 |
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| Product | chaperone protein HscA |
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| Protein accession | YP_733874 |
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| Protein GI | 113970081 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0443] Molecular chaperone |
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| TIGRFAM ID | [TIGR01991] Fe-S protein assembly chaperone HscA |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000392017 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTTT TGCAGATTGC AGAGCCCGGA CAAAGTGCCG CGCCGCACCA ACATAGACTT
GCCGTTGGCA TCGATTTAGG TACCACTAAT TCCCTCGTGG CCGCCGTTCG CAGCGGCGTA
ACGGCGACCT TACCCGATGA AAATGGGCAG CATTCTTTAC CTTCTATCGT CCGTTACACT
CAAGATGGCA TTGAAGTAGG TCAGGTGGCG GCGTTAAGTT CTGCGCAGGA TCCTAAAAAT
ACTATCGTAT CGGTCAAACG CTTTATGGGC CGCAGCCTCA CGGATATTCA ATCTGGTGAG
CAAGCGTTCC CATACCAGTT TGAAGCCAGT GAAAACGGTT TACCGCTGTT TGTTACGCCT
CAAGGGCAAG TGAATCCGGT GCAAGTGTCG GCGGAGATTT TACGTCCTCT GGTTGAACGC
GCCGAGAAAA CCCTCGGTGG CGAGCTGCAG GGTGTTGTGA TCACTGTGCC GGCGTATTTC
GATGATGCGC AGCGTCAAGG GACTAAAGAT GCCGCGTCTT TGCTCGGTGT TAAAGTATTG
CGCCTGCTAA ACGAGCCTAC TGCGGCGGCA ATCGCCTACG GGTTAGATTC GAAGCAAGAA
GGTGTAATCG CGATTTACGA TCTCGGCGGC GGTACCTTCG ATATCTCTAT TCTGCGTTTA
AATCGCGGCG TCTTTGAAGT GCTGGCCACG GGCGGCGATT CGGCGCTGGG CGGCGATGAC
TTTGACCATC TGTTGCAGGC GCATATGCAG CAAGTGTGGC AATTGACGAA CCTTGATCCG
CAGCTAAGCC GTCAGTTATT GATTGAAGCG CGCCGCGTGA AAGAAGCCTT AACCGATGCG
AGTGACGTCG AAGCGAGCCT GACACTTGCC GATGGCACTG TGCTCAAGCA AGTGGTGACC
AAAGCTGAAT TTGATAACTT AATCAGCGCA TTAGTGAAGA AAACTATCGC CAGCTGTCGT
CGCACCCTAC GTGATGCGGG CGTAACGGCT GATGAAGTGT TAGAAACCGT GATGGTGGGT
GGTTCAACCC GCGTGCCATT AGTGCGTGAA CAAGTTGAAG CCTTTTTCGG TAAGGCGCCA
TTAACCTCTA TCGACCCAGA TCGCGTCGTT GCGATTGGCG CGGCGATTCA GGCCGATATT
CTGGTCGGTA ACAAACCCGA GTCTGAATTA TTACTGCTCG ATGTGATCCC CTTGTCATTA
GGGATTGAAA CCATGGGCGG TTTAGTGGAA AAAGTGGTTT CTCGTAACAC CACAATTCCA
GTCGCTCGCG CCCAAGAGTT TACCACCTTT AAGGATGGTC AAACGGCGAT GGCCTTCCAT
GTGGTGCAGG GCGAGCGTGA GTTAGTCGAT GATTGTCGCT CACTCGCACG CTTTACCCTT
AAAGGTATTC CCCCGTTAGC GGCTGGCGCA GCCCATATTC GTGTGACCTT CCAAGTCGAT
GCCGATGGGT TGCTTAGCGT TACCGCGATG GAGAAATCCA CTGGCGTGCA ATCGAGCATT
CAGGTCAAGC CTTCGTTTGG TTTATCGGAT ACCGAAATCG CGACTATGCT CAAGGACTCG
ATGAAGCATG CGAAGGAAGA CATTAGTCGT CGTATGCTGG CCGAGCAGCA AGTGGAGGCG
GCAAGGGTAC TTGAGTCGTT AAATGCGGCG CTTGCAAAAG ATGGTGACCT GCTGACAAGC
GATGAGCGTC AGCAGATTGA TGCGGTCATG GCGCAGCTTG CCGAAATTGC CCGTGGTGAT
GATGCCGATG CGATTAAGCA AGCGATTGAA GTCCTCGATG AACATACTCA GGATTTCGCC
GCGAAGCGTA TGGACAATTC TATTCGAGTG GCCTTTAAGG GTCAGTCAAT TGACAACATA
TAG
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| Protein sequence | MALLQIAEPG QSAAPHQHRL AVGIDLGTTN SLVAAVRSGV TATLPDENGQ HSLPSIVRYT
QDGIEVGQVA ALSSAQDPKN TIVSVKRFMG RSLTDIQSGE QAFPYQFEAS ENGLPLFVTP
QGQVNPVQVS AEILRPLVER AEKTLGGELQ GVVITVPAYF DDAQRQGTKD AASLLGVKVL
RLLNEPTAAA IAYGLDSKQE GVIAIYDLGG GTFDISILRL NRGVFEVLAT GGDSALGGDD
FDHLLQAHMQ QVWQLTNLDP QLSRQLLIEA RRVKEALTDA SDVEASLTLA DGTVLKQVVT
KAEFDNLISA LVKKTIASCR RTLRDAGVTA DEVLETVMVG GSTRVPLVRE QVEAFFGKAP
LTSIDPDRVV AIGAAIQADI LVGNKPESEL LLLDVIPLSL GIETMGGLVE KVVSRNTTIP
VARAQEFTTF KDGQTAMAFH VVQGERELVD DCRSLARFTL KGIPPLAAGA AHIRVTFQVD
ADGLLSVTAM EKSTGVQSSI QVKPSFGLSD TEIATMLKDS MKHAKEDISR RMLAEQQVEA
ARVLESLNAA LAKDGDLLTS DERQQIDAVM AQLAEIARGD DADAIKQAIE VLDEHTQDFA
AKRMDNSIRV AFKGQSIDNI
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