| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1742 |
|---|
| Symbol | hscB |
|---|
| ID | 4252316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 2068649 |
|---|
| End bp | 2069173 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638118353 |
|---|
| Product | co-chaperone HscB |
|---|
| Protein accession | YP_733873 |
|---|
| Protein GI | 113970080 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1076] DnaJ-domain-containing proteins 1 |
|---|
| TIGRFAM ID | [TIGR00714] Fe-S protein assembly co-chaperone HscB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000142747 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTATT TCGAGCTGTT TAAGTTTTCC CCTGCCTTCG ATATTGACAC CGCTGTGCTT
GCAGAACGCT ACCGCGAACT GCAACGGGCG GTGCATCCCG ATAAGTTTGC CAACGATACC
GAGCAACAAC GCTTATTGTC GGTGCAACGC ACTGCGCAAG TGAATGACGG TTATCAAACC
CTAAAAGATC CTATCCGCCG TGCCGAGCAT ATGCTGTCGC TACGTGGTAT CGATTTAAGC
CACGAAACCA CCACAGTGAA AGATACTGCA TTTTTAATGC AGCAGATGGA ATGGCGTGAG
GCGTTAGAAG ACATTCGCGA TAGCGCCGAT CCTCAAGAAT GCATTGATGA GTTATACGAC
TCTTTCGCGG CCTATCGGAC AAAGTTGACG AAATTGCTCA CCGCACAGCT AAGCAGTGAC
AGCGAAGAAG ACGCCTTGTT AGCGGCGGAT CAAGTACGCA AGCTTAAATT TATGGCAAAA
TTACACGATG AGCTGACGCG TATCGAAGAC GCGTTGCTCG ATTAA
|
|---|
| Protein sequence | MNYFELFKFS PAFDIDTAVL AERYRELQRA VHPDKFANDT EQQRLLSVQR TAQVNDGYQT
LKDPIRRAEH MLSLRGIDLS HETTTVKDTA FLMQQMEWRE ALEDIRDSAD PQECIDELYD
SFAAYRTKLT KLLTAQLSSD SEEDALLAAD QVRKLKFMAK LHDELTRIED ALLD
|
|---|
| |