Gene Shewmr4_1709 details

Gene Information

• Locus tag: Shewmr4_1709
• ID: 4252284
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella sp. MR-4
• Kingdom: Bacteria
• Replicon accession: NC_008321
• Strand: +
• Start bp: 2022951
• End bp: 2026415
• Gene Length: 3465 bp
• Protein Length: 1154 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 638118321
• Product: hypothetical protein
• Protein accession: YP_733841
• Protein GI: 113970048

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.18586
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.0585819
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGTCAAG CCCTGGATAA AACCCTAAGA AGCCTGCTTG AAAAATCCGT TGTCCGTGCC 
CGAGAGCTGA CTGAGATTGC CGCACTCGAG GCCTTAACCC GCTTAGGCGT TGGTTTAGGC 
GAGGCGCCAA TCTACCTAAA AGAAGATGAG CGAGCGCTGC GTAACCGCCT GCGCGCCCAT 
GCCCGCCAGC TCGGGGATAG GTTGCACAGC AATAGTAAGC AAGACATAGC GCACTTAAGC 
GCCGAAATGG CGTATGAGCA TTGGCATCGC ATGTTATTTG CCCGATTTTT AGAACAAAAC 
CAGCTGCTCA TGTATGACCA ATACACCGCC GTTACCCTGG CCGAGTGTCA GGAGCTGGCT 
GCCGATGAAG GCGTAAAAGA TGGCTGGCAG CTCGCTGGAG TATTGGCCGA GCGGATGTTG 
CCGCAGATAT TTCGCACCGA CTCGCCGGTG TTTGCCTTAC CGCTCGCCAT TGATAGGGTG 
CGCGAGCTGG AAGACCTCAT TCTCACCCTG CCAACGGCGG TGTTCACGGC TCAGGATAGC 
CTCGGCTGGT GTTATCAGTT TTGGCAAAGC AAGCGTAAAG AAGAGGTGAA TGCCGCCGGT 
GTCCCCATTG GCGCCGATGA GCTAAGTCCG GTCACTCAGC TCTTTACCGA GCCCTATATG 
GTGAGCTTTT TGCTGGATAA CAGTCTGGGC GTCTGGTGGG CGAAAAAACG CTTAACCGAT 
GCCGACCTGC GTAGCGCCAG CGACGAGGCG ACTTTGCGCC GCGCCGCCGC TATTAATGGC 
GTACCGCTGG AGTACCTGCG CTTTGTGAAA ACCAAGGATA GCCAAGGCGA GCTGTGGCAA 
GCCGCAGGCG GCTGGTTTGA CACCTGGCCT GAGGATATCG CTGCGCTTAA AACCCTCGAC 
CCCTGCTGTG GCTCCGGCCA CTTTTTGGTC GCGCTGTTTT TGATGTTGGT GCCGATGCGC 
ATTGAGCTTG AAGGCTGTGA TGCCAAAACC GCCATCGACC TTGTGCTACG GCAAAACCTC 
CACGGCTTGG AGCTCGATAG CCGCTGCGTC GAAATCGCCG CCTTTGCCCT GGCGCTCGAA 
GCCTGGCGCT ACCCTAACGC CGGAGGTTAT CGCACGCTGC CAGCACTTAA CTTGGCCTGC 
TCGGGTCTCG ATGTCAGTGC CCTTAGCAGC GAATGGCAAG CTCTGGCCAA ACAGCGCCCT 
GAGATCAGCG ACGCCTTAGG CTGGTTTGCC CGCACCTTTA ACGACGCGCC CGTGCTCGGC 
AGCCTCATCG ATGTTAATAG TGCTTACTAC CACGGGAAAA AAGAGGGTGA GCCAGCGCCC 
TGGCAACGCT TGCTGGATGC GCAGGCCGGT ATGCAAAACC TAGGTGACGA AGCCCAATCC 
GCCCAAGTCA CCGCCCAGGG CCTGGCGATG GCGGCTAAGC TGCTTGCCAA TCAATACACC 
CTGGTAGCCA CCAACGTACC GTATCTTGCT CGCGGTAAGC AGTGCGACAC CCTAAAAGAT 
TTCTGTGAAA ACTATTACCC TGAAGCTAAG CCCGATTTAG CGACCGTGTT TCTTGAGCGT 
TGCCTCGAGT TCAGCCCCAA AGGTGGCAGC TCAACCATAG TGCTGCCACA AAACTGGCTG 
TTTCTCACCA GCTATAAAAA GTTCCGTGAA AAACTGCTTA CCCAAGACAG CTGGAACCTG 
GTAGCGCGCC TGGGGCCAAG AGCCTTTGAA ACCATCTCTG GTGAGGTTGT GCAAGCCATT 
CTAATCACCC TCAGCAAGGG CGCGGCCGCC CAAGGTGCCT TGCTCCATGG CCTGGATGTC 
TCCGCCCCCA AAACCGCCGC CGACAAAGCT GCACAACTGC TGATTGAGCC GCTGAAAAGC 
GTGGAGCAAG CCAAGCAGTT GGAGAATCCT GATGCAAGAT TATCTCTAGA TATAAGCTTG 
GAGTTGGAGT TACTAGGAGC TAATGCCCAA ACGGGTACAG GAATTCAAAC TTTCGACTCT 
CCAAGATTTT TAAGCCCATT TTGGGAACGC TTTAAAATAG AGAAAAATTA CATTGTGTGC 
CAAACAACGG TAGTTAATTC AACTTTGTTT GGTGGATTAT CTCAATGTTT AAAGTGGGAG 
GGTGGTGAAG GTGACCTTGC CCACATGATG AGTGAGAAGG AGATTTTAGA AAATTACAAA 
AGTGGTATTT GGAGAGCTTG GTCGAGATTT GTCGGGAGAG ATGGCATTTG TGTCAGCTTA 
ATGCGTCATT TGCCAGTTGC TAGGTATTTT GGCCTTTCAT TTGATAACAA TACAGGTGTT 
ATTATTCCGT CAAATAAATC TGATTTACCT GCAATCTGGG CTTATTGTTC TTCTGAGGTA 
TTTAATACTG AATTAAGAAA GATAGACCAG AAGCTTAATG TTACTAATGC CACTCTCGTA 
AAAGTACCAT TTGACATCAA ATATTGGTCT AAAGTCGCCG AAGAACAATA TCCCAAAGGC 
CTCCCTAAGC CCTACAGCAA TGACCCGATT CAATGGATCT TCCATGGTCA TCCTTGCGGC 
TCTGTGGTCT GGGATGAAGA CAAAAAGTGG ACTGTGGTTG CGGAAAAGCG CACCGACGAG 
ACTGTGCTGC AGGTCGCCGT TGCTCGCTTG CTGGGTTACC GCTGGCCTGC CGAGCTTGAT 
GACACCATGG ATCTGGCCGA TGAAATGCGC ACCTGGGTCG ATAAGTGTGA TGACTTGTTA 
GCGCTGCAAG ATGACGATGG CATTGTGTGT TTGCCTGCTA TTCGCGGTGA AAAGGCGGCA 
GCCAATCGCT TAGAGGCCAT GCTGCAGGCA GCCTTCGAGG AGGATTGGTC GGCTTCGGTG 
CTCACGAATC TCCTTGCCAG TGTCGGCAGC AAGAACCTAG AGACCTGGCT TAGGGATAAG 
TTTTTTGAGC AGCACTGCAA ACTCTTCCAG CATCGCCCGT TTATTTGGCA GATTTGGGAT 
GGCCTTAACG ACGGCTTCTC GGTGCTGGTG AACTACCATA AGCTCGACTA CAAAGGCCTG 
GAGCGGCTGA TTTACACCTA CCTTGGTGAG TGGATCCGCA CCCAAGAGCA CGGCGTAAAA 
GAGGGCATTG ATGGCGCCGA CAGCCGTTTG ATGGCCGCCA AAAACTTAAA AGATACCCTC 
GAAGCCATTC TCGAAGGTGA GGCCATTAGC GGAAAAAGCG GCTTGGATAT CTTTGTGCGC 
TGGAAACCGC TGCACGAACA GCCCATAGGC TGGCACCCTG ACTTAAACGA CGGTGTGCGC 
CTGAATATCC GCCCCTTTAT GCAAGCGCCA GACATAGGTA AAAAAGGCGC CGGTATTTTG 
CGCGCCAAGC CCAATATCAA CTGGAATAAA GACCGTGGCA CCGATGTCGA ATCCGCACCT 
TGGTATCACT TAGGTTTGCA GTATGGTGAG AAAGAAGGTG CGCGTATTAA CGACCACCAT 
ATCAGCCTGG CAGATAAACA GGCGGCTAGG GACAAGCAGG AGTAA 

 

Protein sequence

MRQALDKTLR SLLEKSVVRA RELTEIAALE ALTRLGVGLG EAPIYLKEDE RALRNRLRAH 
ARQLGDRLHS NSKQDIAHLS AEMAYEHWHR MLFARFLEQN QLLMYDQYTA VTLAECQELA 
ADEGVKDGWQ LAGVLAERML PQIFRTDSPV FALPLAIDRV RELEDLILTL PTAVFTAQDS 
LGWCYQFWQS KRKEEVNAAG VPIGADELSP VTQLFTEPYM VSFLLDNSLG VWWAKKRLTD 
ADLRSASDEA TLRRAAAING VPLEYLRFVK TKDSQGELWQ AAGGWFDTWP EDIAALKTLD 
PCCGSGHFLV ALFLMLVPMR IELEGCDAKT AIDLVLRQNL HGLELDSRCV EIAAFALALE 
AWRYPNAGGY RTLPALNLAC SGLDVSALSS EWQALAKQRP EISDALGWFA RTFNDAPVLG 
SLIDVNSAYY HGKKEGEPAP WQRLLDAQAG MQNLGDEAQS AQVTAQGLAM AAKLLANQYT 
LVATNVPYLA RGKQCDTLKD FCENYYPEAK PDLATVFLER CLEFSPKGGS STIVLPQNWL 
FLTSYKKFRE KLLTQDSWNL VARLGPRAFE TISGEVVQAI LITLSKGAAA QGALLHGLDV 
SAPKTAADKA AQLLIEPLKS VEQAKQLENP DARLSLDISL ELELLGANAQ TGTGIQTFDS 
PRFLSPFWER FKIEKNYIVC QTTVVNSTLF GGLSQCLKWE GGEGDLAHMM SEKEILENYK 
SGIWRAWSRF VGRDGICVSL MRHLPVARYF GLSFDNNTGV IIPSNKSDLP AIWAYCSSEV 
FNTELRKIDQ KLNVTNATLV KVPFDIKYWS KVAEEQYPKG LPKPYSNDPI QWIFHGHPCG 
SVVWDEDKKW TVVAEKRTDE TVLQVAVARL LGYRWPAELD DTMDLADEMR TWVDKCDDLL 
ALQDDDGIVC LPAIRGEKAA ANRLEAMLQA AFEEDWSASV LTNLLASVGS KNLETWLRDK 
FFEQHCKLFQ HRPFIWQIWD GLNDGFSVLV NYHKLDYKGL ERLIYTYLGE WIRTQEHGVK 
EGIDGADSRL MAAKNLKDTL EAILEGEAIS GKSGLDIFVR WKPLHEQPIG WHPDLNDGVR 
LNIRPFMQAP DIGKKGAGIL RAKPNINWNK DRGTDVESAP WYHLGLQYGE KEGARINDHH 
ISLADKQAAR DKQE