Gene Shewmr4_1707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1707 
Symbol 
ID4252282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2018806 
End bp2019348 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content47% 
IMG OID638118319 
Producthypothetical protein 
Protein accessionYP_733839 
Protein GI113970046 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0681131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACA GACTTACCAA ATTACTTAAC AGCTTTAGCA ACCATATCAG TGTGCCCTGG 
AGTAACACTA TCTCTGCCGA GGAAAAAGCC ATTTTCGTGG TGTATGACAA GGCCGATGAA
CTCAAGCTTA GAGCTCGATT GACTGAATTT GAACAGGCCA GTATCGAGGC CCAACATCCA
TGGTTATTGC TCGATTTAAC CAACGCCTTT GCCAACTGGA TGGCCGAGCA GGATTACAAA
GAAGGCTATT TTGAAGACCC TGAATACCTC GAAGGTAGCT ACGACTACTT TGCTGATGAA
CTGGTGAAAT TACTGAGCGC TGAAATTAAC AACCAGCAAA CGGCCGACAC TGTCGTAGCG
TTAATGGGAT GCGGTGCGCT ATTTGGCTTC CTGTCAGTAT CTGCACTGGT CAAATCGCTG
GCTGCGCAGG TGAATGGCCG CTTGGTGGTG TTTTTCCCCG GAGAATATCA CGACAATAAC
TACAAATTAC TTGATGCCAA GGATGGATGG GGCTATCAAG CCACCGCTAT CACAGCCTTT
TAA
 
Protein sequence
MSDRLTKLLN SFSNHISVPW SNTISAEEKA IFVVYDKADE LKLRARLTEF EQASIEAQHP 
WLLLDLTNAF ANWMAEQDYK EGYFEDPEYL EGSYDYFADE LVKLLSAEIN NQQTADTVVA
LMGCGALFGF LSVSALVKSL AAQVNGRLVV FFPGEYHDNN YKLLDAKDGW GYQATAITAF