Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1707 |
Symbol | |
ID | 4252282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2018806 |
End bp | 2019348 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638118319 |
Product | hypothetical protein |
Protein accession | YP_733839 |
Protein GI | 113970046 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0681131 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGACA GACTTACCAA ATTACTTAAC AGCTTTAGCA ACCATATCAG TGTGCCCTGG AGTAACACTA TCTCTGCCGA GGAAAAAGCC ATTTTCGTGG TGTATGACAA GGCCGATGAA CTCAAGCTTA GAGCTCGATT GACTGAATTT GAACAGGCCA GTATCGAGGC CCAACATCCA TGGTTATTGC TCGATTTAAC CAACGCCTTT GCCAACTGGA TGGCCGAGCA GGATTACAAA GAAGGCTATT TTGAAGACCC TGAATACCTC GAAGGTAGCT ACGACTACTT TGCTGATGAA CTGGTGAAAT TACTGAGCGC TGAAATTAAC AACCAGCAAA CGGCCGACAC TGTCGTAGCG TTAATGGGAT GCGGTGCGCT ATTTGGCTTC CTGTCAGTAT CTGCACTGGT CAAATCGCTG GCTGCGCAGG TGAATGGCCG CTTGGTGGTG TTTTTCCCCG GAGAATATCA CGACAATAAC TACAAATTAC TTGATGCCAA GGATGGATGG GGCTATCAAG CCACCGCTAT CACAGCCTTT TAA
|
Protein sequence | MSDRLTKLLN SFSNHISVPW SNTISAEEKA IFVVYDKADE LKLRARLTEF EQASIEAQHP WLLLDLTNAF ANWMAEQDYK EGYFEDPEYL EGSYDYFADE LVKLLSAEIN NQQTADTVVA LMGCGALFGF LSVSALVKSL AAQVNGRLVV FFPGEYHDNN YKLLDAKDGW GYQATAITAF
|
| |