| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1689 |
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| Symbol | |
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| ID | 4252264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2003552 |
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| End bp | 2003767 |
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| Gene Length | 216 bp |
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| Protein Length | 71 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638118301 |
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| Product | phage transcriptional regulator, AlpA |
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| Protein accession | YP_733821 |
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| Protein GI | 113970028 |
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| COG category | [K] Transcription |
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| COG ID | [COG3311] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.211878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00954058 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCTTGACA GTAATCCGAG TTATTCAATC GTTAGGCTTG CTAGTGTTAT TAAGTTAACT
GGACTATCAC GGTCTACTAT ATACGACAAA CAAAACCCGA AATCTCCTCG ATATGACCAT
ACGTTCCCCC AAAAAGTATC ACTTGGGCCT AGGGCTGTTG GTTGGTATTT TGGCGAGATA
GAATCATGGC TTAAATCAGT CAGAACTCAA AAGTAA
|
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| Protein sequence | MLDSNPSYSI VRLASVIKLT GLSRSTIYDK QNPKSPRYDH TFPQKVSLGP RAVGWYFGEI
ESWLKSVRTQ K
|
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